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  2. Gene 'KH2012:KH.C14.413'

Gene Card

Best human hits

PDIA4; PDIA6; TXNDC5

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00003845

Gene Model ID

KH2012:KH.C14.413

Location

KhC14:2898539..2904175

Transcript Models and Sequences

  KH2012:KH.C14.413.v1.A.SL2-2
KH2012:KH.C14.413.v2.C.nonSL4-1
KH2012:KH.C14.413.v2.C.SL2-1
KH2012:KH.C14.413.v2.C.SL3-1
KH2012:KH.C14.413.v2.R.ND1-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000003517
NCBI Reference Sequence XM_002131951.4
Collections

Gateway full ORF

2 results

cien149946

Plate: VES93_P16

cien229679

Plate: VES105_D16

Gene collection 1 (N. Satoh)

2 results

citb6j18

Plate: R1CiGC29j03

cieg005h22

Plate: R1CiGC16a16

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Thioredoxin_domain ProSiteProfiles Thioredoxin domain
Thioredoxin_domain Pfam Thioredoxin domain
Thioredoxin-like_sf SUPERFAMILY Thioredoxin-like superfamily
Thioredoxin_CS ProSitePatterns Thioredoxin, conserved site

GOSlim

28 results

GO Term Annotation Origin Type
RNA binding Blast molecular function
protein binding Orthology molecular function
extracellular region Orthology cellular component
extracellular space Blast cellular component
cell Orthology cellular component
endoplasmic reticulum Orthology cellular component
endoplasmic reticulum lumen Orthology cellular component
endoplasmic reticulum membrane Blast cellular component
cytosol Blast cellular component
plasma membrane Blast cellular component
protein folding Orthology biological process
cell surface Blast cellular component
membrane Blast cellular component
melanosome Blast cellular component
negative regulation of apoptotic process Orthology biological process
oxidation-reduction process Blast biological process
extracellular exosome Orthology cellular component
catalytic activity Orthology molecular function
cellular response to stress Orthology biological process
cytoplasmic vesicle Orthology cellular component
lysosome Orthology cellular component
vacuolar part Orthology cellular component
endomembrane system Orthology cellular component
intracellular organelle lumen Orthology cellular component
cytoplasmic part Blast cellular component
intracellular membrane-bounded organelle Blast cellular component
endoplasmic reticulum part Blast cellular component
macromolecular complex Blast cellular component

GO (Orthology)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
protein disulfide isomerase activity Hs molecular function
protein binding Hs molecular function
extracellular region Hs cellular component
cell Hs cellular component
endoplasmic reticulum Hs cellular component
endoplasmic reticulum lumen Hs cellular component
protein folding Hs biological process
isomerase activity Hs molecular function
response to endoplasmic reticulum stress Hs biological process
azurophil granule lumen Hs cellular component
negative regulation of apoptotic process Hs biological process
lysosomal lumen Hs cellular component
apoptotic cell clearance Hs biological process
cell redox homeostasis Hs biological process
extracellular exosome Hs cellular component

GO (Blast)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA binding Hs molecular function 127 1.06e-31
protein disulfide isomerase activity Hs molecular function 350 4.39e-118
protein binding Hs molecular function 350 4.39e-118
extracellular region Hs cellular component 350 4.39e-118
extracellular space Hs cellular component 140 7.40e-37
cell Hs cellular component 350 4.39e-118
endoplasmic reticulum Hs cellular component 350 4.39e-118
endoplasmic reticulum lumen Hs cellular component 350 4.39e-118
endoplasmic reticulum membrane Hs cellular component 140 7.40e-37
endoplasmic reticulum-Golgi intermediate compartment Hs cellular component 140 7.40e-37
cytosol Hs cellular component 140 7.40e-37
plasma membrane Hs cellular component 140 7.40e-37
cell surface Hs cellular component 127 1.06e-31
peptide disulfide oxidoreductase activity Hs molecular function 140 7.40e-37
membrane Hs cellular component 140 7.40e-37
isomerase activity Hs molecular function 350 4.39e-118
endoplasmic reticulum chaperone complex Hs cellular component 140 7.40e-37
azurophil granule lumen Hs cellular component 350 4.39e-118
melanosome Hs cellular component 140 7.40e-37
lysosomal lumen Hs cellular component 350 4.39e-118
extracellular exosome Hs cellular component 350 4.39e-118

GO (InterProScan)

1 result

GO Term Analysis Type e-value
cell redox homeostasis Pfam biological process 2.9E-27

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