Aniseed - Gene card

Gene Card

Best human hits

IDH3A; IDH3B; IDH3G

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00003855

Gene Model ID

KH2012:KH.C14.422

Location

KhC14:4149796..4151455

Transcript Models and Sequences

KH2012:KH.C14.422.v1.A.nonSL3-1
KH2012:KH.C14.422.v1.A.nonSL4-1
KH2012:KH.C14.422.v1.A.nonSL5-1
KH2012:KH.C14.422.v1.A.nonSL6-1
KH2012:KH.C14.422.v1.A.SL1-1
KH2012:KH.C14.422.v1.A.SL2-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000007286
NCBI Reference Sequence	XM_002130331.4

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cicl008a24

Plate: R1CiGC09a06

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
Isocitrate_DH_NAD	TIGRFAM	Isocitrate dehydrogenase NAD-dependent
IsoPropMal-DH-like_dom	SMART	Isopropylmalate dehydrogenase-like domain
IsoPropMal-DH-like_dom	Pfam	Isopropylmalate dehydrogenase-like domain
IsoCit/isopropylmalate_DH_CS	ProSitePatterns	Isocitrate/isopropylmalate dehydrogenase, conserved site

GOSlim

15 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
magnesium ion binding	Orthology	molecular function
ATP binding	Blast	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Blast	cellular component
nucleolus	Blast	cellular component
mitochondrion	Orthology	cellular component
mitochondrial matrix	Orthology	cellular component
myelin sheath	Orthology	cellular component
metal ion binding	Orthology	molecular function
oxidation-reduction process	Orthology	biological process
catalytic activity	Orthology	molecular function
organic substance metabolic process	Orthology	biological process
cellular metabolic process	Orthology	biological process
coenzyme binding	Orthology	molecular function

GO (Orthology)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
magnesium ion binding	Hs	molecular function
isocitrate dehydrogenase (NAD+) activity	Hs	molecular function
nucleus	Hs	cellular component
mitochondrion	Hs	cellular component
mitochondrial matrix	Hs	cellular component
carbohydrate metabolic process	Hs	biological process
tricarboxylic acid cycle	Hs	biological process
oxidoreductase activity	Hs	molecular function
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Hs	molecular function
myelin sheath	Hs	cellular component
metal ion binding	Hs	molecular function
NAD binding	Hs	molecular function
oxidation-reduction process	Hs	biological process

GO (Blast)