Aniseed - Gene card

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000002381
NCBI Reference Sequence	XM_009862464.1

Collections

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
HRDC-like_sf	SUPERFAMILY	HRDC-like superfamily
HRDC_dom	ProSiteProfiles	HRDC domain
3'-5'_exonuclease_dom	SMART	3'-5' exonuclease domain
HRDC_dom	Pfam	HRDC domain
HRDC_dom	SMART	HRDC domain
RNaseH-like_sf	SUPERFAMILY	Ribonuclease H-like superfamily
3'-5'_exonuclease_dom	Pfam	3'-5' exonuclease domain

GOSlim

36 results

GO Term	Annotation Origin	Type
nucleotide binding	Blast	molecular function
magnesium ion binding	Blast	molecular function
nucleic acid binding	Blast	molecular function
DNA binding	Blast	molecular function
chromatin binding	Blast	molecular function
RNA binding	Blast	molecular function
catalytic activity	Blast	molecular function
protein binding	Blast	molecular function
ATP binding	Blast	molecular function
intracellular	Blast	cellular component
nucleus	Blast	cellular component
nucleoplasm	Blast	cellular component
nucleolus	Blast	cellular component
cytoplasm	Blast	cellular component
centrosome	Blast	cellular component
cytosol	Blast	cellular component
nucleobase-containing compound metabolic process	InterProScan	biological process
membrane	Blast	cellular component
nuclear speck	Blast	cellular component
hydrolase activity	Blast	molecular function
protein homodimerization activity	Blast	molecular function
neuron projection	Blast	cellular component
cellular metabolic process	InterProScan	biological process
macromolecular complex binding	Blast	molecular function
metal ion binding	Blast	molecular function
RNA metabolic process	Blast	biological process
nuclear lumen	Blast	cellular component
macromolecular complex	Blast	cellular component
intracellular part	Blast	cellular component
intracellular organelle part	Blast	cellular component
intracellular non-membrane-bounded organelle	Blast	cellular component
organelle organization	Blast	biological process
nucleoside-triphosphatase activity	Blast	molecular function
transition metal ion binding	Blast	molecular function
nuclear part	Blast	cellular component
sequence-specific DNA binding	Blast	molecular function

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

53 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	423	8.10e-137
3'-5'-exoribonuclease activity	Hs	molecular function	423	8.10e-137
nuclear exosome (RNase complex)	Hs	cellular component	423	8.10e-137
exosome (RNase complex)	Hs	cellular component	423	8.10e-137
magnesium ion binding	Hs	molecular function	40.8	0.003
four-way junction DNA binding	Hs	molecular function	40.8	0.003
Y-form DNA binding	Hs	molecular function	40.8	0.003
bubble DNA binding	Hs	molecular function	40.8	0.003
chromosome, telomeric region	Hs	cellular component	40.8	0.003
nucleic acid binding	Hs	molecular function	423	8.10e-137
DNA binding	Hs	molecular function	40.8	0.003
DNA helicase activity	Hs	molecular function	40.8	0.003
chromatin binding	Hs	molecular function	40.8	0.003
RNA binding	Hs	molecular function	423	8.10e-137
catalytic activity	Hs	molecular function	423	8.10e-137
ATP-dependent DNA helicase activity	Hs	molecular function	40.8	0.003
helicase activity	Hs	molecular function	40.8	0.003
nuclease activity	Hs	molecular function	423	8.10e-137
exonuclease activity	Hs	molecular function	423	8.10e-137
exoribonuclease activity	Hs	molecular function	423	8.10e-137
protein binding	Hs	molecular function	423	8.10e-137
ATP binding	Hs	molecular function	40.8	0.003
intracellular	Hs	cellular component	423	8.10e-137
nucleus	Hs	cellular component	423	8.10e-137
nucleoplasm	Hs	cellular component	423	8.10e-137
replication fork	Hs	cellular component	40.8	0.003
nucleolus	Hs	cellular component	423	8.10e-137
cytoplasm	Hs	cellular component	423	8.10e-137
centrosome	Hs	cellular component	40.8	0.003
cytosol	Hs	cellular component	423	8.10e-137
ATP-dependent helicase activity	Hs	molecular function	40.8	0.003
3'-5' exonuclease activity	Hs	molecular function	423	8.10e-137
four-way junction helicase activity	Hs	molecular function	40.8	0.003
membrane	Hs	cellular component	423	8.10e-137
nuclear speck	Hs	cellular component	40.8	0.003
hydrolase activity	Hs	molecular function	423	8.10e-137
ATPase activity	Hs	molecular function	40.8	0.003
manganese ion binding	Hs	molecular function	40.8	0.003
MutLalpha complex	Hs	cellular component	40.8	0.003
transcriptionally active chromatin	Hs	cellular component	423	8.10e-137
protein homodimerization activity	Hs	molecular function	40.8	0.003
neuron projection	Hs	cellular component	40.8	0.003
3'-5' DNA helicase activity	Hs	molecular function	40.8	0.003
ATP-dependent 3'-5' DNA helicase activity	Hs	molecular function	40.8	0.003
macromolecular complex binding	Hs	molecular function	40.8	0.003
metal ion binding	Hs	molecular function	40.8	0.003
G-quadruplex DNA binding	Hs	molecular function	40.8	0.003
forked DNA-dependent helicase activity	Hs	molecular function	40.8	0.003
telomeric D-loop binding	Hs	molecular function	40.8	0.003
telomeric G-quadruplex DNA binding	Hs	molecular function	40.8	0.003
telomerase RNA binding	Hs	molecular function	423	8.10e-137
3'-flap-structured DNA binding	Hs	molecular function	40.8	0.003
8-hydroxy-2'-deoxyguanosine DNA binding	Hs	molecular function	40.8	0.003

GO (InterProScan)

7 results

GO Term	Analysis	Type	e-value
nucleotide binding	SUPERFAMILY	molecular function	1.99E-21
nucleic acid binding	SMART	molecular function	1.3E-48
catalytic activity	SUPERFAMILY	molecular function	1.99E-21
intracellular	SMART	cellular component	5.8E-13
nucleobase-containing compound metabolic process	SMART	biological process	1.3E-48
3'-5' exonuclease activity	SMART	molecular function	1.3E-48
cellular metabolic process	SUPERFAMILY	biological process	1.99E-21

Gene Card

Best human hits

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