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GENE CARD

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Gene Card

Best human hits

COL14A1; COL24A1; COL6A2

Unique Gene ID

Cirobu.g00004415

Gene Model ID

KH2012:KH.C2.236

Location

KhC2:7647245..7670992

External Database Gene Card

External database links

2 results

Collections

Gateway full ORF

3 results

cima816558

Plate: VES59_K03

cima863834

Plate: VES65_A08

cima8112974

Plate: VES74_M06

Gene collection 1 (N. Satoh)

3 results

ciad012n07

Plate: R1CiGC02e10

ciad055l21

Plate: R1CiGC05b24

ciht010o22

Plate: R1CiGC43k22

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
vWFA_dom_sf SUPERFAMILY von Willebrand factor A-like domain superfamily
Collagen Pfam Collagen triple helix repeat
VWF_A SMART von Willebrand factor, type A
VWF_A ProSiteProfiles von Willebrand factor, type A
VWF_A Pfam von Willebrand factor, type A
vWFA_dom_sf Gene3D von Willebrand factor A-like domain superfamily

GOSlim

13 results

GO Term Annotation Origin Type
RNA binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
endoplasmic reticulum lumen Blast cellular component
membrane Blast cellular component
macromolecular complex Blast cellular component
extracellular exosome Blast cellular component
extracellular vesicle Blast cellular component
extracellular region part Blast cellular component
structural molecule activity Blast molecular function
macromolecular complex binding Blast molecular function
plasma membrane Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 155 1.97e-38
extracellular matrix structural constituent Hs molecular function 155 1.97e-38
protein binding Hs molecular function 167 1.85e-42
collagen binding Hs molecular function 155 1.97e-38
extracellular region Hs cellular component 167 1.85e-42
proteinaceous extracellular matrix Hs cellular component 167 1.85e-42
collagen trimer Hs cellular component 167 1.85e-42
collagen type XIV trimer Hs cellular component 155 1.97e-38
extracellular space Hs cellular component 167 1.85e-42
endoplasmic reticulum lumen Hs cellular component 167 1.85e-42
membrane Hs cellular component 167 1.85e-42
protein binding, bridging Hs molecular function 155 1.97e-38
extracellular matrix Hs cellular component 167 1.85e-42
macromolecular complex Hs cellular component 167 1.85e-42
sarcolemma Hs cellular component 167 1.85e-42
extracellular exosome Hs cellular component 167 1.85e-42
extracellular vesicle Hs cellular component 167 1.85e-42

GO (InterProScan)

No result

GO Term Analysis Type e-value