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GENE CARD

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Gene Card

Best human hits

EPB41L4A; EPB41L4B; EPB41L5

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00004434

Gene Model ID

KH2012:KH.C2.254

Location

KhC2:6134386..6142543

Transcript Models and Sequences

  KH2012:KH.C2.254.v1.A.SL1-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000003095
NCBI Reference Sequence XM_018817668.1
Collections

Gateway full ORF

2 results

cien199611

Plate: VES101_J06

cien212162

Plate: VES103_L04

Gene collection 1 (N. Satoh)

1 result

cicl053d23

Plate: R1CiGC14a06

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

15 results

IPR Term Analysis Definition
FERM_central CDD FERM central domain
Ez/rad/moesin-like PRINTS Ezrin/radixin/moesin-like
FERM_2 SUPERFAMILY FERM superfamily, second domain
FERM_PH-like_C Pfam FERM, C-terminal PH-like domain
FERM_central Pfam FERM central domain
FERM_CS ProSitePatterns FERM conserved site
FERM_domain ProSiteProfiles FERM domain
Ubiquitin-like_domsf SUPERFAMILY Ubiquitin-like domain superfamily
Band_41_domain PRINTS Band 4.1 domain
Band_41_domain SMART Band 4.1 domain
FERM_N Pfam FERM, N-terminal
FERM/acyl-CoA-bd_prot_sf Gene3D FERM/acyl-CoA-binding protein superfamily
FERM_PH-like_C SMART FERM, C-terminal PH-like domain
FERM-adjacent SMART FERM adjacent (FA)
PH-like_dom_sf Gene3D PH-like domain superfamily

GOSlim

32 results

GO Term Annotation Origin Type
cell morphogenesis involved in differentiation Orthology biological process
nucleus Orthology cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
cytoskeleton Orthology cellular component
plasma membrane Orthology cellular component
adherens junction Orthology cellular component
focal adhesion Orthology cellular component
cytoskeletal protein binding Orthology molecular function
positive regulation of gene expression Orthology biological process
cell junction Orthology cellular component
cell leading edge Orthology cellular component
wound healing Orthology biological process
apical part of cell Orthology cellular component
anatomical structure formation involved in morphogenesis Orthology biological process
multicellular organism development Orthology biological process
animal organ development Orthology biological process
cell differentiation Orthology biological process
anatomical structure morphogenesis Orthology biological process
cell adhesion Orthology biological process
organelle organization Orthology biological process
structural molecule activity Orthology molecular function
anatomical structure development Orthology biological process
cell migration Orthology biological process
cell morphogenesis Orthology biological process
regulation of gene expression Orthology biological process
protein binding Orthology molecular function
regulation of molecular function Orthology biological process
cell projection membrane Orthology cellular component
system development Orthology biological process
establishment of protein localization Orthology biological process
cellular response to organic substance Orthology biological process

GO (Orthology)

46 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
cell morphogenesis involved in differentiation Hs biological process
somitogenesis Hs biological process
epithelial to mesenchymal transition Hs biological process
neural plate morphogenesis Hs biological process
positive regulation of cell-matrix adhesion Hs biological process
epithelial cell morphogenesis Hs biological process
apical constriction Hs biological process
structural constituent of cytoskeleton Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
plasma membrane Hs cellular component
adherens junction Hs cellular component
bicellular tight junction Hs cellular component
focal adhesion Hs cellular component
ectoderm development Hs biological process
endoderm development Hs biological process
mesoderm development Hs biological process
mesoderm migration involved in gastrulation Hs biological process
cytoskeletal protein binding Hs molecular function
unidimensional cell growth Hs biological process
posttranscriptional regulation of gene expression Hs biological process
positive regulation of gene expression Hs biological process
positive regulation of epithelial to mesenchymal transition Hs biological process
protein domain specific binding Hs molecular function
negative regulation of cell-cell adhesion Hs biological process
actin cytoskeleton organization Hs biological process
cell junction Hs cellular component
actomyosin structure organization Hs biological process
cell leading edge Hs cellular component
negative regulation of protein binding Hs biological process
positive regulation of protein binding Hs biological process
somite rostral/caudal axis specification Hs biological process
ruffle membrane Hs cellular component
wound healing Hs biological process
apical part of cell Hs cellular component
positive regulation of cell adhesion Hs biological process
axial mesoderm development Hs biological process
axial mesoderm morphogenesis Hs biological process
paraxial mesoderm development Hs biological process
embryonic foregut morphogenesis Hs biological process
positive regulation of focal adhesion assembly Hs biological process
regulation of establishment of protein localization Hs biological process
left/right axis specification Hs biological process
cellular response to transforming growth factor beta stimulus Hs biological process

GO (Blast)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
structural constituent of cytoskeleton Hs molecular function 533 0.0
nucleus Hs cellular component 533 0.0
cytoplasm Hs cellular component 533 0.0
cytosol Hs cellular component 533 0.0
cytoskeleton Hs cellular component 533 0.0
plasma membrane Hs cellular component 533 0.0
adherens junction Hs cellular component 533 0.0
bicellular tight junction Hs cellular component 460 2.63e-154
focal adhesion Hs cellular component 533 0.0
cytoskeletal protein binding Hs molecular function 533 0.0
protein domain specific binding Hs molecular function 533 0.0
cell junction Hs cellular component 533 0.0
cell leading edge Hs cellular component 533 0.0
ruffle membrane Hs cellular component 533 0.0
apical part of cell Hs cellular component 460 2.63e-154

GO (InterProScan)

2 results

GO Term Analysis Type e-value
cytoskeleton ProSiteProfiles cellular component 78.995
cytoskeletal protein binding PRINTS molecular function 4.2E-11

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