Aniseed - Gene card

Gene 'KH2012:KH.C2.546'

Gene Card

Best human hits

PFDN2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00004755

Gene Model ID

KH2012:KH.C2.546

Location

KhC2:4615969..4617139

Transcript Models and Sequences

KH2012:KH.C2.546.v1.A.nonSL2-1
KH2012:KH.C2.546.v1.A.nonSL3-1
KH2012:KH.C2.546.v1.A.SL1-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000000301
NCBI Reference Sequence	XM_002127481.2

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cicl015a13

Plate: R1CiGC10e21

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
Prefoldin	Gene3D	Prefoldin
PFD2	PANTHER	Prefoldin subunit 2
PFD_beta-like	Pfam	Prefoldin beta-like

GOSlim

10 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
cytoplasm	Orthology	cellular component
mitochondrion	Orthology	cellular component
cytosol	Orthology	cellular component
protein folding	Orthology	biological process
unfolded protein binding	Orthology	molecular function
extracellular exosome	Orthology	cellular component
macromolecular complex	Orthology	cellular component
organelle organization	Orthology	biological process

GO (Orthology)

11 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
protein binding	Hs	molecular function
nucleus	Hs	cellular component
cytoplasm	Hs	cellular component
mitochondrion	Hs	cellular component
cytosol	Hs	cellular component
protein folding	Hs	biological process
prefoldin complex	Hs	cellular component
protein binding involved in protein folding	Hs	molecular function
unfolded protein binding	Hs	molecular function
positive regulation of cytoskeleton organization	Hs	biological process
extracellular exosome	Hs	cellular component

GO (Blast)

9 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
protein binding	Hs	molecular function	145	1.47e-45
nucleus	Hs	cellular component	145	1.47e-45
cytoplasm	Hs	cellular component	145	1.47e-45
mitochondrion	Hs	cellular component	145	1.47e-45
cytosol	Hs	cellular component	145	1.47e-45
prefoldin complex	Hs	cellular component	145	1.47e-45
protein binding involved in protein folding	Hs	molecular function	145	1.47e-45
unfolded protein binding	Hs	molecular function	145	1.47e-45
extracellular exosome	Hs	cellular component	145	1.47e-45

GO (InterProScan)