Login
Help

GENE CARD

Submit your Data

  1. > 
  2. > 
  3. > 
  4. > 

Gene Card

Best human hits

SERINC1; SERINC2; SERINC3

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00005043

Gene Model ID

KH2012:KH.C2.810

Location

KhC2:254441..260276

Transcript Models and Sequences

  KH2012:KH.C2.810.v1.A.SL1-1

External Database Gene Card

External database links

1 result

Database Gene ID
ENSEMBL ENSCING00000004218
Collections

Gateway full ORF

2 results

cien98060

Plate: VES85_L16

cien195530

Plate: VES100_K15

Gene collection 1 (N. Satoh)

1 result

cilv035a24

Plate: R1CiGC27l20

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree
 Click here to see the tree inference method

Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Serinc3 PANTHER Serine incorporator 3
TDE1/TMS PANTHER Serine incorporator/TMS membrane protein
TDE1/TMS Pfam Serine incorporator/TMS membrane protein

GOSlim

22 results

GO Term Annotation Origin Type
Golgi membrane Orthology cellular component
immune system process Orthology biological process
protein binding Orthology molecular function
cytoplasm Orthology cellular component
endoplasmic reticulum Orthology cellular component
endoplasmic reticulum membrane Orthology cellular component
Golgi apparatus Orthology cellular component
plasma membrane Orthology cellular component
membrane Orthology cellular component
integral component of membrane Orthology cellular component
enzyme binding Orthology molecular function
innate immune response Orthology biological process
perinuclear region of cytoplasm Orthology cellular component
extracellular exosome Orthology cellular component
cellular biosynthetic process Orthology biological process
organic substance metabolic process Orthology biological process
phosphate-containing compound metabolic process Orthology biological process
cellular metabolic process Orthology biological process
transmembrane transport Orthology biological process
organic substance transport Orthology biological process
cation transport Orthology biological process
defense response Orthology biological process

GO (Orthology)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
Golgi membrane Hs cellular component
immune system process Hs biological process
protein binding Hs molecular function
cytoplasm Hs cellular component
endoplasmic reticulum Hs cellular component
endoplasmic reticulum membrane Hs cellular component
Golgi apparatus Hs cellular component
plasma membrane Hs cellular component
L-serine biosynthetic process Hs biological process
lipid metabolic process Hs biological process
phosphatidylserine metabolic process Hs biological process
sphingolipid metabolic process Hs biological process
phospholipid biosynthetic process Hs biological process
detection of virus Hs biological process
L-serine transmembrane transporter activity Hs molecular function
L-serine transport Hs biological process
membrane Hs cellular component
integral component of membrane Hs cellular component
enzyme binding Hs molecular function
protein binding, bridging Hs molecular function
innate immune response Hs biological process
perinuclear region of cytoplasm Hs cellular component
defense response to virus Hs biological process
extracellular exosome Hs cellular component

GO (Blast)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
Golgi membrane Hs cellular component 458 6.18e-159
protein binding Hs molecular function 486 1.85e-170
cytoplasm Hs cellular component 458 6.18e-159
endoplasmic reticulum Hs cellular component 486 1.85e-170
endoplasmic reticulum membrane Hs cellular component 486 1.85e-170
Golgi apparatus Hs cellular component 458 6.18e-159
plasma membrane Hs cellular component 486 1.85e-170
L-serine transmembrane transporter activity Hs molecular function 486 1.85e-170
membrane Hs cellular component 486 1.85e-170
integral component of membrane Hs cellular component 486 1.85e-170
enzyme binding Hs molecular function 486 1.85e-170
protein binding, bridging Hs molecular function 486 1.85e-170
perinuclear region of cytoplasm Hs cellular component 458 6.18e-159
extracellular exosome Hs cellular component 486 1.85e-170

GO (InterProScan)

3 results

GO Term Analysis Type e-value
phosphatidylserine metabolic process PANTHER biological process 7.8E-176
sphingolipid metabolic process PANTHER biological process 7.8E-176
membrane PANTHER cellular component 7.8E-176

Back to Top