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GENE CARD

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Gene Card

Best human hits

MALRD1; MAMDC2; MDGA2

Unique Gene ID

Cirobu.g00005319

Gene Model ID

KH2012:KH.C3.161

Location

KhC3:1605643..1617513

Transcript Models and Sequences

  KH2012:KH.C3.161.v2.A.ND1-2

External Database Gene Card

External database links

No result

Collections

Gene collection 1 (N. Satoh)

1 result

citb050c16

Plate: R1CiGC45d20

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
MAM_dom SMART MAM domain
MAM_dom CDD MAM domain
MAM_dom ProSiteProfiles MAM domain
ConA-like_dom_sf SUPERFAMILY Concanavalin A-like lectin/glucanase domain superfamily
MAM_dom Pfam MAM domain

GOSlim

12 results

GO Term Annotation Origin Type
protein binding Blast molecular function
extracellular region Blast cellular component
cytoplasm Blast cellular component
endoplasmic reticulum Blast cellular component
Golgi apparatus Blast cellular component
plasma membrane Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
cytoplasmic vesicle Blast cellular component
intracellular organelle part Blast cellular component
organelle membrane Blast cellular component
intrinsic component of membrane Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
protein binding Hs molecular function 73.9 8.18e-15
extracellular region Hs cellular component 75.1 3.00e-15
proteinaceous extracellular matrix Hs cellular component 75.1 3.00e-15
cytoplasm Hs cellular component 73.9 8.18e-15
endoplasmic reticulum Hs cellular component 75.1 3.00e-15
Golgi apparatus Hs cellular component 73.9 8.18e-15
plasma membrane Hs cellular component 68.9 3.77e-13
membrane Hs cellular component 75.1 3.00e-15
integral component of membrane Hs cellular component 73.9 8.18e-15
cytoplasmic vesicle membrane Hs cellular component 73.9 8.18e-15
anchored component of membrane Hs cellular component 68.9 3.77e-13
cytoplasmic vesicle Hs cellular component 73.9 8.18e-15

GO (InterProScan)

1 result

GO Term Analysis Type e-value
membrane CDD cellular component 3.2248E-35