Aniseed - Gene card

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000008919
NCBI Reference Sequence	XM_002128799.4

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

3 results

citb080o05

Plate: R1CiGC46b09

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
Prenyl_trans_a	ProSiteProfiles	Protein prenyltransferase, alpha subunit
Leu-rich_rpt	ProSiteProfiles	Leucine-rich repeat
RabGGTase_alpha	PANTHER	Geranylgeranyl transferase type-2 subunit alpha
LRR_dom_sf	Gene3D	Leucine-rich repeat domain superfamily
RabGGT_asu_insert-domain	Pfam	Rab geranylgeranyltransferase, alpha subunit, insert-domain
Prenyl_trans_a	Pfam	Protein prenyltransferase, alpha subunit

GOSlim

31 results

GO Term	Annotation Origin	Type
integrin binding	Blast	molecular function
protein binding	Orthology	molecular function
nucleoplasm	Orthology	cellular component
cytoplasm	Blast	cellular component
endosome	Blast	cellular component
early endosome	Blast	cellular component
cytosol	Orthology	cellular component
plasma membrane	Orthology	cellular component
cellular protein modification process	Orthology	biological process
visual perception	Orthology	biological process
microtubule binding	Blast	molecular function
zinc ion binding	Orthology	molecular function
membrane	Blast	cellular component
transferase activity	Orthology	molecular function
identical protein binding	Blast	molecular function
regulation of apoptotic process	Orthology	biological process
protein heterodimerization activity	Orthology	molecular function
cytoplasmic part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
enzyme binding	Orthology	molecular function
cytoskeletal part	Blast	cellular component
microtubule cytoskeleton	Blast	cellular component
intracellular part	Blast	cellular component
molecular function regulator	Blast	molecular function
cation binding	Blast	molecular function
regulation of signal transduction	Blast	biological process
transmembrane signaling receptor activity	Blast	molecular function
receptor binding	Blast	molecular function
protein kinase binding	Blast	molecular function
anion binding	Blast	molecular function
tubulin binding	Blast	molecular function

GO (Orthology)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
prenyltransferase activity	Hs	molecular function
Rab geranylgeranyltransferase activity	Hs	molecular function
protein binding	Hs	molecular function
nucleoplasm	Hs	cellular component
cytosol	Hs	cellular component
plasma membrane	Hs	cellular component
Rab-protein geranylgeranyltransferase complex	Hs	cellular component
cellular protein modification process	Hs	biological process
visual perception	Hs	biological process
zinc ion binding	Hs	molecular function
protein prenyltransferase activity	Hs	molecular function
transferase activity	Hs	molecular function
Rab GTPase binding	Hs	molecular function
protein prenylation	Hs	biological process
protein geranylgeranylation	Hs	biological process
regulation of apoptotic process	Hs	biological process
post-translational protein modification	Hs	biological process
protein heterodimerization activity	Hs	molecular function

GO (Blast)

30 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
prenyltransferase activity	Hs	molecular function	439	1.03e-148
protein farnesyltransferase activity	Hs	molecular function	54.7	6.99e-08
protein geranylgeranyltransferase activity	Hs	molecular function	54.7	6.99e-08
CAAX-protein geranylgeranyltransferase activity	Hs	molecular function	54.7	6.99e-08
Rab geranylgeranyltransferase activity	Hs	molecular function	439	1.03e-148
integrin binding	Hs	molecular function	44.7	1.72e-04
protein binding	Hs	molecular function	439	1.03e-148
nucleoplasm	Hs	cellular component	439	1.03e-148
cytoplasm	Hs	cellular component	54.7	6.99e-08
endosome	Hs	cellular component	44.7	1.72e-04
early endosome	Hs	cellular component	44.7	1.72e-04
cytosol	Hs	cellular component	439	1.03e-148
microtubule associated complex	Hs	cellular component	54.7	6.99e-08
plasma membrane	Hs	cellular component	439	1.03e-148
CAAX-protein geranylgeranyltransferase complex	Hs	cellular component	54.7	6.99e-08
protein farnesyltransferase complex	Hs	cellular component	54.7	6.99e-08
Rab-protein geranylgeranyltransferase complex	Hs	cellular component	439	1.03e-148
microtubule binding	Hs	molecular function	54.7	6.99e-08
zinc ion binding	Hs	molecular function	439	1.03e-148
protein prenyltransferase activity	Hs	molecular function	439	1.03e-148
membrane	Hs	cellular component	44.7	1.72e-04
transferase activity	Hs	molecular function	439	1.03e-148
Rab GTPase binding	Hs	molecular function	439	1.03e-148
acetylcholine receptor regulator activity	Hs	molecular function	54.7	6.99e-08
receptor tyrosine kinase binding	Hs	molecular function	54.7	6.99e-08
phosphatidylinositol binding	Hs	molecular function	44.7	1.72e-04
identical protein binding	Hs	molecular function	44.7	1.72e-04
alpha-tubulin binding	Hs	molecular function	54.7	6.99e-08
protein heterodimerization activity	Hs	molecular function	439	1.03e-148
recycling endosome	Hs	cellular component	44.7	1.72e-04

GO (InterProScan)

7 results

GO Term	Analysis	Type	e-value
Rab geranylgeranyltransferase activity	Pfam	molecular function	9.7E-7
protein binding	ProSiteProfiles	molecular function	4.855
Rab-protein geranylgeranyltransferase complex	PANTHER	cellular component	6.3E-109
zinc ion binding	Pfam	molecular function	9.7E-7
protein prenyltransferase activity	Pfam	molecular function	6.4E-9
protein prenylation	Pfam	biological process	6.4E-9
protein geranylgeranylation	PANTHER	biological process	6.3E-109

Gene Card

Best human hits

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Unique Gene ID

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Transcript Models and Sequences