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GENE CARD

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Gene Card

Best human hits

AIFM1; AIFM2; AIFM3

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00005666

Gene Model ID

KH2012:KH.C3.483

Location

KhC3:5489028..5492108

Transcript Models and Sequences

  KH2012:KH.C3.483.v1.C.SL1-1
KH2012:KH.C3.483.v1.C.SL2-1
KH2012:KH.C3.483.v1.C.SL3-1
KH2012:KH.C3.483.v1.C.SL4-1
KH2012:KH.C3.483.v1.C.SL5-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000020047
NCBI Reference Sequence XM_002129044.2
Collections

Gene collection 1 (N. Satoh)

1 result

cilv002k06

Plate: R1CiGC25c23

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Pyridine_nuc-diS_OxRdtase_2 PRINTS Pyridine nucleotide-disulphide oxidoreductase, class-II
FAD/NAD-binding_dom Pfam FAD/NAD(P)-binding domain
FAD/NAD-bd_sf SUPERFAMILY FAD/NAD(P)-binding domain superfamily

GOSlim

29 results

GO Term Annotation Origin Type
DNA binding Orthology molecular function
protein binding Blast molecular function
extracellular space Orthology cellular component
nucleus Blast cellular component
cytoplasm Orthology cellular component
mitochondrion Orthology cellular component
mitochondrial inner membrane Blast cellular component
endoplasmic reticulum Blast cellular component
cytosol Orthology cellular component
apoptotic process Orthology biological process
membrane Orthology cellular component
integral component of membrane Orthology cellular component
regulation of apoptotic process Orthology biological process
positive regulation of apoptotic process Orthology biological process
metal ion binding Blast molecular function
protein dimerization activity Blast molecular function
perinuclear region of cytoplasm Blast cellular component
flavin adenine dinucleotide binding Orthology molecular function
oxidation-reduction process Orthology biological process
cellular metabolic process Orthology biological process
catalytic activity Orthology molecular function
whole membrane Orthology cellular component
mitochondrial membrane Orthology cellular component
bounding membrane of organelle Orthology cellular component
intracellular non-membrane-bounded organelle Orthology cellular component
organelle organization Orthology biological process
mitochondrial envelope Blast cellular component
intracellular organelle lumen Blast cellular component
cofactor binding Blast molecular function

GO (Orthology)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
DNA binding Hs molecular function
electron-transferring-flavoprotein dehydrogenase activity Hs molecular function
extracellular space Hs cellular component
cytoplasm Hs cellular component
mitochondrion Hs cellular component
mitochondrial outer membrane Hs cellular component
lipid droplet Hs cellular component
cytosol Hs cellular component
apoptotic process Hs biological process
apoptotic mitochondrial changes Hs biological process
membrane Hs cellular component
integral component of membrane Hs cellular component
oxidoreductase activity Hs molecular function
respiratory electron transport chain Hs biological process
regulation of apoptotic process Hs biological process
positive regulation of apoptotic process Hs biological process
flavin adenine dinucleotide binding Hs molecular function
oxidation-reduction process Hs biological process

GO (Blast)

25 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
DNA binding Hs molecular function 224 2.75e-70
electron-transferring-flavoprotein dehydrogenase activity Hs molecular function 224 2.75e-70
protein binding Hs molecular function 44.3 1.04e-04
extracellular space Hs cellular component 224 2.75e-70
nucleus Hs cellular component 44.3 1.04e-04
cytoplasm Hs cellular component 224 2.75e-70
mitochondrion Hs cellular component 224 2.75e-70
mitochondrial outer membrane Hs cellular component 224 2.75e-70
mitochondrial inner membrane Hs cellular component 44.3 1.04e-04
mitochondrial intermembrane space Hs cellular component 44.3 1.04e-04
endoplasmic reticulum Hs cellular component 43.5 1.68e-04
lipid droplet Hs cellular component 224 2.75e-70
cytosol Hs cellular component 224 2.75e-70
membrane Hs cellular component 224 2.75e-70
integral component of membrane Hs cellular component 224 2.75e-70
NAD(P)H oxidase activity Hs molecular function 44.3 1.04e-04
oxidoreductase activity Hs molecular function 224 2.75e-70
oxidoreductase activity, acting on NAD(P)H Hs molecular function 44.3 1.04e-04
metal ion binding Hs molecular function 43.5 1.68e-04
protein dimerization activity Hs molecular function 44.3 1.04e-04
perinuclear region of cytoplasm Hs cellular component 44.3 1.04e-04
flavin adenine dinucleotide binding Hs molecular function 224 2.75e-70
iron-sulfur cluster binding Hs molecular function 43.5 1.68e-04
2 iron, 2 sulfur cluster binding Hs molecular function 43.5 1.68e-04
FAD binding Hs molecular function 44.3 1.04e-04

GO (InterProScan)

2 results

GO Term Analysis Type e-value
oxidoreductase activity Pfam molecular function 1.1E-37
oxidation-reduction process Pfam biological process 1.1E-37

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