Aniseed - Gene card

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Gene 'KH2012:KH.C3.672'

Gene Card

Best human hits

SLC38A1; SLC38A7; SLC38A8

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00005870

Gene Model ID

KH2012:KH.C3.672

Location

KhC3:5672342..5676059

Transcript Models and Sequences

KH2012:KH.C3.672.v1.B.nonSL3-1
KH2012:KH.C3.672.v1.B.SL1-1
KH2012:KH.C3.672.v1.B.SL2-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000008904
NCBI Reference Sequence	XM_002126310.3

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

citb037c11

Plate: R1CiGC32k06

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term	Analysis	Definition
AA_transpt_TM	Pfam	Amino acid transporter, transmembrane domain

GOSlim

13 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
plasma membrane	Blast	cellular component
integral component of plasma membrane	Blast	cellular component
ion transport	Orthology	biological process
sodium ion transport	Orthology	biological process
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
axon	Orthology	cellular component
neuronal cell body	Orthology	cellular component
extracellular exosome	Blast	cellular component
organic substance transport	Orthology	biological process
transmembrane transport	Orthology	biological process
cation transport	Orthology	biological process

GO (Orthology)

29 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
amino acid transmembrane transport	Hs	biological process
L-histidine transmembrane transporter activity	Hs	molecular function
L-glutamate transmembrane transporter activity	Hs	molecular function
protein binding	Hs	molecular function
ion transport	Hs	biological process
sodium ion transport	Hs	biological process
drug transmembrane transport	Hs	biological process
amino acid transport	Hs	biological process
asparagine transport	Hs	biological process
glutamine transport	Hs	biological process
amino acid transmembrane transporter activity	Hs	molecular function
L-amino acid transmembrane transporter activity	Hs	molecular function
L-alanine transmembrane transporter activity	Hs	molecular function
L-asparagine transmembrane transporter activity	Hs	molecular function
L-aspartate transmembrane transporter activity	Hs	molecular function
L-glutamine transmembrane transporter activity	Hs	molecular function
L-leucine transmembrane transporter activity	Hs	molecular function
L-methionine transmembrane transporter activity	Hs	molecular function
L-serine transmembrane transporter activity	Hs	molecular function
L-alanine transport	Hs	biological process
L-glutamate transport	Hs	biological process
L-serine transport	Hs	biological process
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
axon	Hs	cellular component
neuronal cell body	Hs	cellular component
L-histidine transmembrane transport	Hs	biological process
cation transmembrane transport	Hs	biological process
L-alpha-amino acid transmembrane transport	Hs	biological process

GO (Blast)

22 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
sodium:amino acid symporter activity	Hs	molecular function	117	2.68e-28
L-histidine transmembrane transporter activity	Hs	molecular function	321	1.24e-105
L-glutamate transmembrane transporter activity	Hs	molecular function	321	1.24e-105
protein binding	Hs	molecular function	321	1.24e-105
plasma membrane	Hs	cellular component	117	2.68e-28
integral component of plasma membrane	Hs	cellular component	117	2.68e-28
amino acid transmembrane transporter activity	Hs	molecular function	265	7.03e-84
neutral amino acid transmembrane transporter activity	Hs	molecular function	117	2.68e-28
L-amino acid transmembrane transporter activity	Hs	molecular function	321	1.24e-105
L-alanine transmembrane transporter activity	Hs	molecular function	321	1.24e-105
L-asparagine transmembrane transporter activity	Hs	molecular function	321	1.24e-105
L-aspartate transmembrane transporter activity	Hs	molecular function	321	1.24e-105
L-glutamine transmembrane transporter activity	Hs	molecular function	321	1.24e-105
L-leucine transmembrane transporter activity	Hs	molecular function	321	1.24e-105
L-methionine transmembrane transporter activity	Hs	molecular function	321	1.24e-105
L-serine transmembrane transporter activity	Hs	molecular function	321	1.24e-105
symporter activity	Hs	molecular function	117	2.68e-28
membrane	Hs	cellular component	321	1.24e-105
integral component of membrane	Hs	cellular component	321	1.24e-105
axon	Hs	cellular component	321	1.24e-105
neuronal cell body	Hs	cellular component	321	1.24e-105
extracellular exosome	Hs	cellular component	117	2.68e-28

GO (InterProScan)