Aniseed - Gene card

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000022002

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

2 results

cign013d08

Plate: R1CiGC41p06

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
RNaseH_sf	Gene3D	Ribonuclease H superfamily
3'-5'_exonuclease_dom	SMART	3'-5' exonuclease domain
3'-5'_exonuclease_dom	Pfam	3'-5' exonuclease domain
RNaseH-like_sf	SUPERFAMILY	Ribonuclease H-like superfamily

GOSlim

30 results

GO Term	Annotation Origin	Type
nucleotide binding	Blast	molecular function
magnesium ion binding	Blast	molecular function
nucleic acid binding	Blast	molecular function
DNA binding	Blast	molecular function
chromatin binding	Blast	molecular function
catalytic activity	Blast	molecular function
protein binding	Blast	molecular function
ATP binding	Blast	molecular function
intracellular	Blast	cellular component
nucleus	Blast	cellular component
nucleoplasm	Blast	cellular component
nucleolus	Blast	cellular component
cytoplasm	Blast	cellular component
centrosome	Blast	cellular component
nucleobase-containing compound metabolic process	InterProScan	biological process
DNA metabolic process	Blast	biological process
nuclear speck	Blast	cellular component
hydrolase activity	Blast	molecular function
protein homodimerization activity	Blast	molecular function
neuron projection	Blast	cellular component
macromolecular complex binding	Blast	molecular function
metal ion binding	Blast	molecular function
intracellular organelle part	Blast	cellular component
intracellular non-membrane-bounded organelle	Blast	cellular component
organelle organization	Blast	biological process
nucleoside-triphosphatase activity	Blast	molecular function
transition metal ion binding	Blast	molecular function
nuclear part	Blast	cellular component
macromolecular complex	Blast	cellular component
sequence-specific DNA binding	Blast	molecular function

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

46 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	160	5.37e-45
magnesium ion binding	Hs	molecular function	160	5.37e-45
four-way junction DNA binding	Hs	molecular function	160	5.37e-45
Y-form DNA binding	Hs	molecular function	160	5.37e-45
bubble DNA binding	Hs	molecular function	160	5.37e-45
chromosome, telomeric region	Hs	cellular component	160	5.37e-45
nucleic acid binding	Hs	molecular function	160	5.37e-45
DNA binding	Hs	molecular function	160	5.37e-45
DNA helicase activity	Hs	molecular function	160	5.37e-45
chromatin binding	Hs	molecular function	160	5.37e-45
catalytic activity	Hs	molecular function	160	5.37e-45
ATP-dependent DNA helicase activity	Hs	molecular function	160	5.37e-45
helicase activity	Hs	molecular function	160	5.37e-45
nuclease activity	Hs	molecular function	160	5.37e-45
exonuclease activity	Hs	molecular function	160	5.37e-45
protein binding	Hs	molecular function	160	5.37e-45
ATP binding	Hs	molecular function	160	5.37e-45
intracellular	Hs	cellular component	160	5.37e-45
nucleus	Hs	cellular component	160	5.37e-45
nucleoplasm	Hs	cellular component	160	5.37e-45
replication fork	Hs	cellular component	160	5.37e-45
nucleolus	Hs	cellular component	160	5.37e-45
cytoplasm	Hs	cellular component	160	5.37e-45
centrosome	Hs	cellular component	160	5.37e-45
ATP-dependent helicase activity	Hs	molecular function	160	5.37e-45
single-stranded DNA 3'-5' exodeoxyribonuclease activity	Hs	molecular function	55.1	6.68e-09
3'-5' exonuclease activity	Hs	molecular function	160	5.37e-45
exodeoxyribonuclease I activity	Hs	molecular function	55.1	6.68e-09
four-way junction helicase activity	Hs	molecular function	160	5.37e-45
nuclear speck	Hs	cellular component	160	5.37e-45
hydrolase activity	Hs	molecular function	160	5.37e-45
ATPase activity	Hs	molecular function	160	5.37e-45
manganese ion binding	Hs	molecular function	160	5.37e-45
MutLalpha complex	Hs	cellular component	160	5.37e-45
protein homodimerization activity	Hs	molecular function	160	5.37e-45
neuron projection	Hs	cellular component	160	5.37e-45
3'-5' DNA helicase activity	Hs	molecular function	160	5.37e-45
ATP-dependent 3'-5' DNA helicase activity	Hs	molecular function	160	5.37e-45
macromolecular complex binding	Hs	molecular function	160	5.37e-45
metal ion binding	Hs	molecular function	160	5.37e-45
G-quadruplex DNA binding	Hs	molecular function	160	5.37e-45
forked DNA-dependent helicase activity	Hs	molecular function	160	5.37e-45
telomeric D-loop binding	Hs	molecular function	160	5.37e-45
telomeric G-quadruplex DNA binding	Hs	molecular function	160	5.37e-45
3'-flap-structured DNA binding	Hs	molecular function	160	5.37e-45
8-hydroxy-2'-deoxyguanosine DNA binding	Hs	molecular function	160	5.37e-45

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
nucleic acid binding	Gene3D	molecular function	4.3E-52
nucleobase-containing compound metabolic process	Pfam	biological process	1.2E-24
3'-5' exonuclease activity	Pfam	molecular function	1.2E-24

Gene Card

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