Aniseed - Gene card

External Database Gene Card

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No result

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Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg014b19

Plate: R1CiGC17b11

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
Prot_kinase_dom	Pfam	Protein kinase domain
Protein_kinase_ATP_BS	ProSitePatterns	Protein kinase, ATP binding site
Prot_kinase_dom	ProSiteProfiles	Protein kinase domain
Ser/Thr_kinase_AS	ProSitePatterns	Serine/threonine-protein kinase, active site
Kinase-like_dom_sf	SUPERFAMILY	Protein kinase-like domain superfamily
Prot_kinase_dom	SMART	Protein kinase domain

GOSlim

53 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Orthology	molecular function
DNA binding	Orthology	molecular function
chromatin binding	Orthology	molecular function
RNA binding	Orthology	molecular function
protein kinase activity	Orthology	molecular function
protein serine/threonine kinase activity	Orthology	molecular function
protein binding	Orthology	molecular function
ATP binding	Orthology	molecular function
extracellular region	Blast	cellular component
extracellular space	Blast	cellular component
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
Golgi apparatus	Blast	cellular component
cytosol	Blast	cellular component
DNA repair	Orthology	biological process
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
transcription from RNA polymerase II promoter	Orthology	biological process
transcription initiation from RNA polymerase II promoter	Orthology	biological process
mRNA processing	Orthology	biological process
protein phosphorylation	Orthology	biological process
cellular response to DNA damage stimulus	Orthology	biological process
transcription factor binding	Orthology	molecular function
cell proliferation	Orthology	biological process
membrane	Orthology	cellular component
kinase activity	Orthology	molecular function
phosphorylation	Orthology	biological process
nuclear speck	Blast	cellular component
transferase activity	Orthology	molecular function
protein kinase binding	Orthology	molecular function
transcription regulatory region DNA binding	Orthology	molecular function
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
cell cycle	Orthology	biological process
molecular transducer activity	Orthology	molecular function
intracellular non-membrane-bounded organelle	Orthology	cellular component
nucleoplasm part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
nuclear body	Orthology	cellular component
DNA replication	Orthology	biological process
organelle organization	Orthology	biological process
cytoplasmic part	Orthology	cellular component
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
negative regulation of gene expression	Orthology	biological process
protein ubiquitination	Orthology	biological process
nucleolus	Blast	cellular component
intracellular part	Blast	cellular component
nuclear part	Blast	cellular component
intracellular organelle part	Blast	cellular component
cytoplasmic vesicle	Blast	cellular component
endomembrane system	Blast	cellular component
intracellular organelle lumen	Blast	cellular component

GO (Orthology)

48 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function
transcription coactivator binding	Hs	molecular function
DNA binding	Hs	molecular function
chromatin binding	Hs	molecular function
protein kinase activity	Hs	molecular function
protein serine/threonine kinase activity	Hs	molecular function
cyclin-dependent protein serine/threonine kinase activity	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
chromosome	Hs	cellular component
cytoplasm	Hs	cellular component
DNA repair	Hs	biological process
regulation of DNA repair	Hs	biological process
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
transcription from RNA polymerase II promoter	Hs	biological process
transcription initiation from RNA polymerase II promoter	Hs	biological process
transcription elongation from RNA polymerase II promoter	Hs	biological process
protein phosphorylation	Hs	biological process
cellular response to DNA damage stimulus	Hs	biological process
transcription elongation factor complex	Hs	cellular component
cyclin/CDK positive transcription elongation factor complex	Hs	cellular component
transcription factor binding	Hs	molecular function
cell proliferation	Hs	biological process
RNA polymerase II carboxy-terminal domain kinase activity	Hs	molecular function
membrane	Hs	cellular component
kinase activity	Hs	molecular function
phosphorylation	Hs	biological process
PML body	Hs	cellular component
transferase activity	Hs	molecular function
snRNA binding	Hs	molecular function
protein kinase binding	Hs	molecular function
cyclin binding	Hs	molecular function
replication fork processing	Hs	biological process
positive regulation of histone phosphorylation	Hs	biological process
cytoplasmic ribonucleoprotein granule	Hs	cellular component
response to drug	Hs	biological process
snRNA transcription from RNA polymerase II promoter	Hs	biological process
transcription regulatory region DNA binding	Hs	molecular function
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
phosphorylation of RNA polymerase II C-terminal domain	Hs	biological process
negative regulation of cell cycle arrest	Hs	biological process
7SK snRNA binding	Hs	molecular function
negative regulation of mRNA polyadenylation	Hs	biological process
positive regulation of histone H2B ubiquitination	Hs	biological process

GO (Blast)

39 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	572	0.0
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	572	0.0
transcription coactivator binding	Hs	molecular function	572	0.0
fibrillar center	Hs	cellular component	293	3.44e-89
cyclin K-CDK12 complex	Hs	cellular component	293	3.44e-89
cyclin K-CDK13 complex	Hs	cellular component	288	1.59e-87
DNA binding	Hs	molecular function	572	0.0
chromatin binding	Hs	molecular function	572	0.0
RNA binding	Hs	molecular function	288	1.59e-87
protein kinase activity	Hs	molecular function	572	0.0
protein serine/threonine kinase activity	Hs	molecular function	572	0.0
cyclin-dependent protein serine/threonine kinase activity	Hs	molecular function	572	0.0
protein binding	Hs	molecular function	572	0.0
ATP binding	Hs	molecular function	572	0.0
extracellular region	Hs	cellular component	288	1.59e-87
extracellular space	Hs	cellular component	288	1.59e-87
nucleus	Hs	cellular component	572	0.0
nucleoplasm	Hs	cellular component	572	0.0
chromosome	Hs	cellular component	572	0.0
cytoplasm	Hs	cellular component	572	0.0
Golgi apparatus	Hs	cellular component	288	1.59e-87
cytosol	Hs	cellular component	288	1.59e-87
transcription elongation factor complex	Hs	cellular component	572	0.0
cyclin/CDK positive transcription elongation factor complex	Hs	cellular component	572	0.0
transcription factor binding	Hs	molecular function	572	0.0
RNA polymerase II carboxy-terminal domain kinase activity	Hs	molecular function	572	0.0
membrane	Hs	cellular component	572	0.0
kinase activity	Hs	molecular function	572	0.0
PML body	Hs	cellular component	572	0.0
nuclear speck	Hs	cellular component	293	3.44e-89
transferase activity	Hs	molecular function	572	0.0
snRNA binding	Hs	molecular function	572	0.0
protein kinase binding	Hs	molecular function	572	0.0
nuclear cyclin-dependent protein kinase holoenzyme complex	Hs	cellular component	293	3.44e-89
cyclin binding	Hs	molecular function	572	0.0
cytoplasmic ribonucleoprotein granule	Hs	cellular component	572	0.0
transcription regulatory region DNA binding	Hs	molecular function	572	0.0
7SK snRNA binding	Hs	molecular function	572	0.0
ficolin-1-rich granule lumen	Hs	cellular component	288	1.59e-87

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
protein kinase activity	SMART	molecular function	4.4E-90
ATP binding	SMART	molecular function	4.4E-90
protein phosphorylation	SMART	biological process	4.4E-90

Gene Card

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