Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

ANGPTL1; FCN2; TNR

Unique Gene ID

Cirobu.g00006206

Gene Model ID

KH2012:KH.C4.139

Location

KhC4:1167925..1169956

Transcript Models and Sequences

  KH2012:KH.C4.139.v1.A.ND1-1

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Fibrinogen_a/b/g_C_dom CDD Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
Fibrinogen-like_C SUPERFAMILY Fibrinogen-like, C-terminal
Fibrinogen_a/b/g_C_dom Pfam Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
Fibrinogen_a/b/g_C_dom ProSiteProfiles Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
Fibrinogen_a/b/g_C_dom SMART Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain

GOSlim

13 results

GO Term Annotation Origin Type
serine-type endopeptidase activity Blast molecular function
receptor binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
cell surface Blast cellular component
membrane raft Blast cellular component
metal ion binding Blast molecular function
extracellular exosome Blast cellular component
binding Blast molecular function
macromolecular complex Blast cellular component
carbohydrate derivative binding Blast molecular function
extracellular region part Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
antigen binding Hs molecular function 149 3.06e-43
serine-type endopeptidase activity Hs molecular function 149 3.06e-43
receptor binding Hs molecular function 150 7.74e-42
protein binding Hs molecular function 157 4.80e-43
extracellular region Hs cellular component 157 4.80e-43
proteinaceous extracellular matrix Hs cellular component 157 4.80e-43
collagen trimer Hs cellular component 149 3.06e-43
extracellular space Hs cellular component 150 7.74e-42
cell surface Hs cellular component 157 4.80e-43
carbohydrate binding Hs molecular function 149 3.06e-43
proteoglycan binding Hs molecular function 149 3.06e-43
membrane raft Hs cellular component 157 4.80e-43
metal ion binding Hs molecular function 149 3.06e-43
calcium-dependent protein binding Hs molecular function 149 3.06e-43
extracellular exosome Hs cellular component 150 7.74e-42
perineuronal net Hs cellular component 157 4.80e-43
blood microparticle Hs cellular component 149 3.06e-43
mannan binding Hs molecular function 149 3.06e-43

GO (InterProScan)

No result

GO Term Analysis Type e-value