Gene Card
Best human hits
CARF; TCF19
Unique Gene ID
Cirobu.g00006230
Gene Model ID
KH2012:KH.C4.162
Location
KhC4:3794191..3798096
Transcript Models and Sequences
External database links
3 results
Gateway full ORF
2 results
cien165799
Plate: VES95_L23
cien188052
Plate: VES99_A09
Gene collection 1 (N. Satoh)
1 result
cieg027g22
Plate: R1CiGC19p16
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
5 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Znf_RING/FYVE/PHD | Gene3D | Zinc finger, RING/FYVE/PHD-type |
| Znf_PHD | SMART | Zinc finger, PHD-type |
| Peptidase_C48_C | Pfam | Ulp1 protease family, C-terminal catalytic domain |
| Znf_FYVE_PHD | SUPERFAMILY | Zinc finger, FYVE/PHD-type |
| CaRF | Pfam | Calcium-responsive transcription factor |
GOSlim
10 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| RNA polymerase II core promoter proximal region sequence-specific DNA binding | Blast | molecular function |
| DNA binding | Blast | molecular function |
| transcription factor activity, sequence-specific DNA binding | Blast | molecular function |
| protein binding | Blast | molecular function |
| nucleus | Blast | cellular component |
| nucleoplasm | Blast | cellular component |
| nucleolus | Blast | cellular component |
| metal ion binding | Blast | molecular function |
| proteolysis | InterProScan | biological process |
| peptidase activity, acting on L-amino acid peptides | InterProScan | molecular function |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
9 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| RNA polymerase II core promoter proximal region sequence-specific DNA binding | Hs | molecular function | 45.1 | 1.62e-04 |
| transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding | Hs | molecular function | 45.1 | 1.62e-04 |
| DNA binding | Hs | molecular function | 45.1 | 1.62e-04 |
| transcription factor activity, sequence-specific DNA binding | Hs | molecular function | 45.1 | 1.62e-04 |
| protein binding | Hs | molecular function | 40.4 | 0.003 |
| nucleus | Hs | cellular component | 45.1 | 1.62e-04 |
| nucleoplasm | Hs | cellular component | 45.1 | 1.62e-04 |
| nucleolus | Hs | cellular component | 45.1 | 1.62e-04 |
| metal ion binding | Hs | molecular function | 40.4 | 0.003 |
GO (InterProScan)
2 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| proteolysis | Pfam | biological process | 1.1E-4 |
| cysteine-type peptidase activity | Pfam | molecular function | 1.1E-4 |
