Aniseed - Gene card

Gene Card

Best human hits

SEPT2; SEPT4; SEPT5

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00006281

Gene Model ID

KH2012:KH.C4.208

Location

KhC4:4232062..4238764

Transcript Models and Sequences

KH2012:KH.C4.208.v1.A.ND2-1
KH2012:KH.C4.208.v2.A.nonSL3-1
KH2012:KH.C4.208.v2.R.ND1-1
KH2012:KH.C4.208.v3.A.nonSL3-1
KH2012:KH.C4.208.v3.R.ND1-1
KH2012:KH.C4.208.v4.A.nonSL3-1
KH2012:KH.C4.208.v4.R.ND1-1

External Database Gene Card

External database links

12 results

Database	Gene ID
ENSEMBL	ENSCING00000008866
NCBI Reference Sequence	XM_002125416.4
NCBI Reference Sequence	XM_009860053.2
NCBI Reference Sequence	XM_009860055.2
NCBI Reference Sequence	XM_009860056.2
NCBI Reference Sequence	XM_009860057.2
NCBI Reference Sequence	XM_018811564.1
NCBI Reference Sequence	XM_018811565.1
NCBI Reference Sequence	XM_018811566.1
NCBI Reference Sequence	XM_018811567.1
NCBI Reference Sequence	XM_018811568.1
NCBI Reference Sequence	XR_001974701.1

Collections

Gateway full ORF

4 results

Gene collection 1 (N. Satoh)

1 result

citb038c07

Plate: R1CiGC32d17

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
Septin	PIRSF	Septin
G_SEPTIN_dom	Pfam	Septin-type guanine nucleotide-binding (G) domain
Septin2	PRINTS	Septin 2
Septin	CDD	Septin
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase
G_SEPTIN_dom	ProSiteProfiles	Septin-type guanine nucleotide-binding (G) domain

GOSlim

46 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
magnesium ion binding	Blast	molecular function
GTPase activity	Blast	molecular function
structural molecule activity	Blast	molecular function
protein binding	Orthology	molecular function
GTP binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Blast	cellular component
cytoplasm	Orthology	cellular component
mitochondrion	Blast	cellular component
cytoskeleton	Orthology	cellular component
plasma membrane	Orthology	cellular component
cell cycle	Orthology	biological process
spermatogenesis	Orthology	biological process
membrane	Orthology	cellular component
cell differentiation	Orthology	biological process
midbody	Orthology	cellular component
neuron projection development	Orthology	biological process
protein homodimerization activity	Blast	molecular function
cell projection	Orthology	cellular component
myelin sheath	Blast	cellular component
perinuclear region of cytoplasm	Orthology	cellular component
regulation of catalytic activity	Orthology	biological process
cell division	Orthology	biological process
extracellular exosome	Orthology	cellular component
cytoplasmic part	Orthology	cellular component
cell periphery	Orthology	cellular component
macromolecular complex	Orthology	cellular component
intracellular organelle part	Orthology	cellular component
intracellular non-membrane-bounded organelle	Orthology	cellular component
cytoskeletal part	Orthology	cellular component
microtubule cytoskeleton	Orthology	cellular component
cell projection part	Orthology	cellular component
microtubule	Orthology	cellular component
plasma membrane region	Orthology	cellular component
cell surface receptor signaling pathway	Orthology	biological process
organelle part	Orthology	cellular component
neuron projection	Orthology	cellular component
cell adhesion molecule binding	Orthology	molecular function
cell projection membrane	Orthology	cellular component
bounding membrane of organelle	Orthology	cellular component
organelle	Orthology	cellular component
cytoplasmic vesicle	Blast	cellular component
synapse part	Blast	cellular component
endomembrane system	Blast	cellular component
neuron part	Blast	cellular component

GO (Orthology)

35 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
exocyst	Hs	cellular component
nucleotide binding	Hs	molecular function
chromosome, centromeric region	Hs	cellular component
kinetochore	Hs	cellular component
condensed chromosome kinetochore	Hs	cellular component
protein binding	Hs	molecular function
GTP binding	Hs	molecular function
nucleus	Hs	cellular component
chromosome	Hs	cellular component
cytoplasm	Hs	cellular component
spindle	Hs	cellular component
cytoskeleton	Hs	cellular component
plasma membrane	Hs	cellular component
axoneme	Hs	cellular component
cell cortex	Hs	cellular component
cell cycle	Hs	biological process
smoothened signaling pathway	Hs	biological process
spermatogenesis	Hs	biological process
membrane	Hs	cellular component
cell differentiation	Hs	biological process
midbody	Hs	cellular component
septin complex	Hs	cellular component
neuron projection development	Hs	biological process
cleavage furrow	Hs	cellular component
photoreceptor connecting cilium	Hs	cellular component
cell projection	Hs	cellular component
cadherin binding	Hs	molecular function
perinuclear region of cytoplasm	Hs	cellular component
regulation of catalytic activity	Hs	biological process
cell division	Hs	biological process
ciliary membrane	Hs	cellular component
cilium assembly	Hs	biological process
extracellular exosome	Hs	cellular component
sperm annulus	Hs	cellular component
non-motile cilium	Hs	cellular component

GO (Blast)

37 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
exocyst	Hs	cellular component	548	0.0
nucleotide binding	Hs	molecular function	548	0.0
magnesium ion binding	Hs	molecular function	450	2.83e-156
chromosome, centromeric region	Hs	cellular component	548	0.0
kinetochore	Hs	cellular component	548	0.0
condensed chromosome kinetochore	Hs	cellular component	548	0.0
GTPase activity	Hs	molecular function	450	2.83e-156
structural molecule activity	Hs	molecular function	450	2.83e-156
protein binding	Hs	molecular function	548	0.0
GTP binding	Hs	molecular function	548	0.0
nucleus	Hs	cellular component	548	0.0
nucleoplasm	Hs	cellular component	450	2.83e-156
chromosome	Hs	cellular component	548	0.0
cytoplasm	Hs	cellular component	548	0.0
mitochondrion	Hs	cellular component	450	2.83e-156
spindle	Hs	cellular component	548	0.0
cytoskeleton	Hs	cellular component	548	0.0
plasma membrane	Hs	cellular component	548	0.0
axoneme	Hs	cellular component	548	0.0
cell cortex	Hs	cellular component	548	0.0
synaptic vesicle	Hs	cellular component	433	2.56e-151
membrane	Hs	cellular component	548	0.0
midbody	Hs	cellular component	548	0.0
septin complex	Hs	cellular component	548	0.0
motile cilium	Hs	cellular component	450	2.83e-156
cleavage furrow	Hs	cellular component	548	0.0
photoreceptor connecting cilium	Hs	cellular component	548	0.0
sperm flagellum	Hs	cellular component	450	2.83e-156
protein homodimerization activity	Hs	molecular function	450	2.83e-156
cell projection	Hs	cellular component	548	0.0
myelin sheath	Hs	cellular component	450	2.83e-156
cadherin binding	Hs	molecular function	548	0.0
perinuclear region of cytoplasm	Hs	cellular component	548	0.0
ciliary membrane	Hs	cellular component	548	0.0
extracellular exosome	Hs	cellular component	548	0.0
sperm annulus	Hs	cellular component	548	0.0
non-motile cilium	Hs	cellular component	548	0.0

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
GTP binding	CDD	molecular function	9.51797E-162
cell cycle	PRINTS	biological process	8.2E-9
cell division	PRINTS	biological process	8.2E-9