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Gene Card

Best human hits

ATP8B1; ATP8B2; ATP8B4

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00006329

Gene Model ID

KH2012:KH.C4.254

Location

KhC4:3374342..3392400

Transcript Models and Sequences

  KH2012:KH.C4.254.v1.A.SL1-1
KH2012:KH.C4.254.v1.A.SL2-1

External Database Gene Card

External database links

3 results

Database Gene ID
ENSEMBL ENSCING00000006046
NCBI Reference Sequence XM_018811743.1
NCBI Reference Sequence XM_018811744.1
Collections

Gateway full ORF

2 results

cien51197

Plate: VES78_H07

cima813691

Plate: VES58_D14

Gene collection 1 (N. Satoh)

4 results

cicl003c08

Plate: R1CiGC08b11

cieg031c04

Plate: R1CiGC20j09

cieg037d13

Plate: R1CiGC21o02

citb018j05

Plate: R1CiGC31i05

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

12 results

IPR Term Analysis Definition
ATPase_P-typ_TM_dom_sf SUPERFAMILY P-type ATPase, transmembrane domain superfamily
P_typ_ATPase TIGRFAM P-type ATPase
HAD-like_sf SUPERFAMILY HAD-like superfamily
P-type_ATPase_IV TIGRFAM P-type ATPase, subfamily IV
ATP8B4 PANTHER Probable phospholipid-transporting ATPase IM
ATPase_P-typ_cyto_dom_N SUPERFAMILY P-type ATPase, cytoplasmic domain N
ATPase_P-typ_transduc_dom_A_sf SUPERFAMILY P-type ATPase, A domain superfamily
ATPase_P-typ_cyto_dom_N Gene3D P-type ATPase, cytoplasmic domain N
P_typ_ATPase_c Pfam P-type ATPase, C-terminal
P-type_ATPase_IV PANTHER P-type ATPase, subfamily IV
ATPase_P-typ_P_site ProSitePatterns P-type ATPase, phosphorylation site
P-type_ATPase_N Pfam P-type ATPase, N-terminal

GOSlim

36 results

GO Term Annotation Origin Type
nucleotide binding Orthology molecular function
magnesium ion binding Orthology molecular function
protein binding Orthology molecular function
ATP binding Orthology molecular function
endoplasmic reticulum Orthology cellular component
endoplasmic reticulum membrane Orthology cellular component
Golgi apparatus Orthology cellular component
plasma membrane Orthology cellular component
integral component of plasma membrane Orthology cellular component
sensory perception of sound Orthology biological process
membrane Orthology cellular component
integral component of membrane Orthology cellular component
apical plasma membrane Orthology cellular component
hydrolase activity Orthology molecular function
brush border membrane Orthology cellular component
cell projection Orthology cellular component
negative regulation of transcription, DNA-templated Orthology biological process
metal ion binding Orthology molecular function
cytoplasmic vesicle Orthology cellular component
organic substance transport Orthology biological process
membrane organization Orthology biological process
ion transport Orthology biological process
nucleoside-triphosphatase activity Orthology molecular function
transmembrane transport Orthology biological process
organelle organization Orthology biological process
cellular metabolic process Orthology biological process
neuron projection Orthology cellular component
cluster of actin-based cell projections Orthology cellular component
cell projection assembly Orthology biological process
whole membrane Orthology cellular component
intracellular organelle part Orthology cellular component
endomembrane system Orthology cellular component
bounding membrane of organelle Orthology cellular component
neuron development Orthology biological process
animal organ development Orthology biological process
anion binding Orthology molecular function

GO (Orthology)

38 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
nucleotide binding Hs molecular function
magnesium ion binding Hs molecular function
phospholipid-translocating ATPase activity Hs molecular function
lipid transporter activity Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
endoplasmic reticulum Hs cellular component
endoplasmic reticulum membrane Hs cellular component
Golgi apparatus Hs cellular component
plasma membrane Hs cellular component
integral component of plasma membrane Hs cellular component
drug transmembrane transport Hs biological process
lipid transport Hs biological process
Golgi organization Hs biological process
sensory perception of sound Hs biological process
bile acid metabolic process Hs biological process
aminophospholipid transporter activity Hs molecular function
bile acid and bile salt transport Hs biological process
phospholipid transport Hs biological process
aminophospholipid transport Hs biological process
membrane Hs cellular component
integral component of membrane Hs cellular component
apical plasma membrane Hs cellular component
hydrolase activity Hs molecular function
brush border membrane Hs cellular component
stereocilium Hs cellular component
regulation of microvillus assembly Hs biological process
ion transmembrane transport Hs biological process
specific granule membrane Hs cellular component
cell projection Hs cellular component
phospholipid translocation Hs biological process
negative regulation of transcription, DNA-templated Hs biological process
metal ion binding Hs molecular function
inner ear receptor cell development Hs biological process
tertiary granule membrane Hs cellular component
cardiolipin binding Hs molecular function
acrosomal membrane Hs cellular component
cytoplasmic vesicle Hs cellular component

GO (Blast)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 1350 0.0
magnesium ion binding Hs molecular function 1350 0.0
phospholipid-translocating ATPase activity Hs molecular function 1350 0.0
lipid transporter activity Hs molecular function 1137 0.0
protein binding Hs molecular function 1137 0.0
ATP binding Hs molecular function 1350 0.0
endoplasmic reticulum Hs cellular component 1350 0.0
endoplasmic reticulum membrane Hs cellular component 1350 0.0
Golgi apparatus Hs cellular component 1350 0.0
plasma membrane Hs cellular component 1350 0.0
integral component of plasma membrane Hs cellular component 1137 0.0
aminophospholipid transporter activity Hs molecular function 1137 0.0
membrane Hs cellular component 1350 0.0
integral component of membrane Hs cellular component 1350 0.0
apical plasma membrane Hs cellular component 1137 0.0
hydrolase activity Hs molecular function 1350 0.0
brush border membrane Hs cellular component 1137 0.0
stereocilium Hs cellular component 1137 0.0
specific granule membrane Hs cellular component 1328 0.0
cell projection Hs cellular component 1137 0.0
metal ion binding Hs molecular function 1350 0.0
tertiary granule membrane Hs cellular component 1328 0.0
cardiolipin binding Hs molecular function 1137 0.0

GO (InterProScan)

6 results

GO Term Analysis Type e-value
nucleotide binding SUPERFAMILY molecular function 4.8E-24
magnesium ion binding PANTHER molecular function 0.0
phospholipid-translocating ATPase activity PANTHER molecular function 0.0
ATP binding PANTHER molecular function 0.0
phospholipid transport PANTHER biological process 0.0
integral component of membrane PANTHER cellular component 0.0

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