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GENE CARD

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Gene Card

Best human hits

SEMA6A; SEMA6B; SEMA6D

Unique Gene ID

Cirobu.g00006836

Gene Model ID

KH2012:KH.C4.719

Location

KhC4:5438787..5451103

Transcript Models and Sequences

  KH2012:KH.C4.719.v1.A.SL1-1

External Database Gene Card
Collections

Gateway full ORF

4 results

cien103438

Plate: VES86_O12

cien29230

Plate: VES74_K24

cien139705

Plate: VES92_A03

cien217538

Plate: VES103_L24

Gene collection 1 (N. Satoh)

2 results

citb029m10

Plate: R1CiGC31d07

cign042o22

Plate: R1CiGC42m20

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Semap_dom_sf SUPERFAMILY Sema domain superfamily
WD40/YVTN_repeat-like_dom_sf Gene3D WD40/YVTN repeat-like-containing domain superfamily
Semap_dom ProSiteProfiles Sema domain
Semaphorin PANTHER Semaphorin
Semap_dom Pfam Sema domain
Semap_dom SMART Sema domain

GOSlim

10 results

GO Term Annotation Origin Type
transmembrane signaling receptor activity Blast molecular function
protein binding Blast molecular function
cytoplasm Blast cellular component
Golgi apparatus Blast cellular component
plasma membrane Blast cellular component
integral component of plasma membrane Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
axon Blast cellular component
receptor binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
transmembrane signaling receptor activity Hs molecular function 290 5.45e-82
protein binding Hs molecular function 290 5.45e-82
cytoplasm Hs cellular component 268 2.21e-74
Golgi apparatus Hs cellular component 268 2.21e-74
plasma membrane Hs cellular component 290 5.45e-82
integral component of plasma membrane Hs cellular component 290 5.45e-82
membrane Hs cellular component 290 5.45e-82
integral component of membrane Hs cellular component 290 5.45e-82
semaphorin receptor binding Hs molecular function 290 5.45e-82
axon Hs cellular component 290 5.45e-82

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Gene3D molecular function 3.5E-71