Gene Card
Best human hits
CARF; PHF8
Unique Gene ID
Cirobu.g00006889
Gene Model ID
KH2012:KH.C4.768
Location
KhC4:3803767..3807462
Transcript Models and Sequences
External database links
2 results
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000015439 |
| NCBI Reference Sequence | XM_009860032.2 |
Gateway full ORF
1 result
cien212814
Plate: VES103_J08
Gene collection 1 (N. Satoh)
2 results
cicl056p20
Plate: R1CiGC14d24
citb041b04
Plate: R1CiGC32p14
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
5 results
| IPR Term | Analysis | Definition |
|---|---|---|
| CaRF | Pfam | Calcium-responsive transcription factor |
| Znf_FYVE_PHD | SUPERFAMILY | Zinc finger, FYVE/PHD-type |
| Znf_RING/FYVE/PHD | Gene3D | Zinc finger, RING/FYVE/PHD-type |
| Znf_PHD | SMART | Zinc finger, PHD-type |
| Peptidase_C48_C | Pfam | Ulp1 protease family, C-terminal catalytic domain |
GOSlim
18 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| RNA polymerase II core promoter proximal region sequence-specific DNA binding | Blast | molecular function |
| DNA binding | Blast | molecular function |
| chromatin binding | Blast | molecular function |
| transcription factor activity, sequence-specific DNA binding | Blast | molecular function |
| iron ion binding | Blast | molecular function |
| protein binding | Blast | molecular function |
| nucleus | Blast | cellular component |
| nucleoplasm | Blast | cellular component |
| nucleolus | Blast | cellular component |
| zinc ion binding | Blast | molecular function |
| nuclear membrane | Blast | cellular component |
| metal ion binding | Blast | molecular function |
| oxidation-reduction process | Blast | biological process |
| proteolysis | InterProScan | biological process |
| catalytic activity | Blast | molecular function |
| organelle organization | Blast | biological process |
| cellular protein modification process | Blast | biological process |
| peptidase activity, acting on L-amino acid peptides | InterProScan | molecular function |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
22 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| RNA polymerase II core promoter proximal region sequence-specific DNA binding | Hs | molecular function | 53.5 | 3.17e-07 |
| transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding | Hs | molecular function | 53.5 | 3.17e-07 |
| DNA binding | Hs | molecular function | 53.5 | 3.17e-07 |
| chromatin binding | Hs | molecular function | 39.7 | 0.007 |
| transcription factor activity, sequence-specific DNA binding | Hs | molecular function | 53.5 | 3.17e-07 |
| iron ion binding | Hs | molecular function | 39.7 | 0.007 |
| protein binding | Hs | molecular function | 39.7 | 0.007 |
| nucleus | Hs | cellular component | 53.5 | 3.17e-07 |
| nucleoplasm | Hs | cellular component | 53.5 | 3.17e-07 |
| nucleolus | Hs | cellular component | 53.5 | 3.17e-07 |
| zinc ion binding | Hs | molecular function | 39.7 | 0.007 |
| oxidoreductase activity | Hs | molecular function | 39.7 | 0.007 |
| oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | Hs | molecular function | 39.7 | 0.007 |
| nuclear membrane | Hs | cellular component | 39.7 | 0.007 |
| histone demethylase activity | Hs | molecular function | 39.7 | 0.007 |
| histone demethylase activity (H3-K9 specific) | Hs | molecular function | 39.7 | 0.007 |
| methylated histone binding | Hs | molecular function | 39.7 | 0.007 |
| histone demethylase activity (H4-K20 specific) | Hs | molecular function | 39.7 | 0.007 |
| metal ion binding | Hs | molecular function | 39.7 | 0.007 |
| dioxygenase activity | Hs | molecular function | 39.7 | 0.007 |
| histone demethylase activity (H3-K36 specific) | Hs | molecular function | 39.7 | 0.007 |
| histone demethylase activity (H3-K27 specific) | Hs | molecular function | 39.7 | 0.007 |
GO (InterProScan)
2 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| proteolysis | Pfam | biological process | 5.5E-5 |
| cysteine-type peptidase activity | Pfam | molecular function | 5.5E-5 |
