Aniseed - Gene card

Gene Card

Best human hits

ADSL; FH

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00007098

Gene Model ID

KH2012:KH.C5.229

Location

KhC5:3295182..3297038

Transcript Models and Sequences

KH2012:KH.C5.229.v1.A.nonSL4-1
KH2012:KH.C5.229.v1.A.SL1-1
KH2012:KH.C5.229.v1.A.SL2-1
KH2012:KH.C5.229.v1.A.SL3-1
KH2012:KH.C5.229.v1.A.SL5-1
KH2012:KH.C5.229.v1.A.SL6-1

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000008077

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg019a04

Plate: R1CiGC18i20

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term	Analysis	Definition
Fumarase_C_C	Pfam	Fumarase C, C-terminal
Fum_hydII	PANTHER	Fumarate hydratase, class II
Fumarate_lyase_N	Pfam	Fumarate lyase, N-terminal
Fumarate_lyase_CS	ProSitePatterns	Fumarate lyase, conserved site
L-Aspartase-like	SUPERFAMILY	L-Aspartase-like
Fumarate_lyase_fam	PRINTS	Fumarate lyase family
Fumarase/histidase_N	Gene3D	Fumarase/histidase, N-terminal
Fum_hydII	CDD	Fumarate hydratase, class II
Fum_hydII	TIGRFAM	Fumarate hydratase, class II
Fum_hydII	Hamap	Fumarate hydratase, class II

GOSlim

12 results

GO Term	Annotation Origin	Type
catalytic activity	Orthology	molecular function
protein binding	Orthology	molecular function
cytoplasm	Orthology	cellular component
mitochondrion	Orthology	cellular component
mitochondrial matrix	Orthology	cellular component
cytosol	Blast	cellular component
extracellular exosome	Orthology	cellular component
oxidation-reduction process	Orthology	biological process
cellular metabolic process	Orthology	biological process
organic substance metabolic process	Orthology	biological process
cytoplasmic part	Orthology	cellular component
macromolecular complex	Orthology	cellular component

GO (Orthology)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
catalytic activity	Hs	molecular function
fumarate hydratase activity	Hs	molecular function
protein binding	Hs	molecular function
cytoplasm	Hs	cellular component
mitochondrion	Hs	cellular component
mitochondrial matrix	Hs	cellular component
tricarboxylic acid cycle	Hs	biological process
fumarate metabolic process	Hs	biological process
malate metabolic process	Hs	biological process
lyase activity	Hs	molecular function
tricarboxylic acid cycle enzyme complex	Hs	cellular component
homeostasis of number of cells within a tissue	Hs	biological process
extracellular exosome	Hs	cellular component

GO (Blast)