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  2. Gene 'KH2012:KH.C3.623' > 
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Gene Card

Best human hits

LRP4; LRP6

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00007111

Gene Model ID

KH2012:KH.C5.240

Location

KhC5:4561610..4572221

Transcript Models and Sequences

  KH2012:KH.C5.240.v1.B.SL1-1
KH2012:KH.C5.240.v2.B.ND2-1
KH2012:KH.C5.240.v3.A.SL1-2

External Database Gene Card

External database links

8 results

Database Gene ID
ENSEMBL ENSCING00000012102
NCBI Reference Sequence XM_002129120.4
NCBI Reference Sequence XM_018812014.1
NCBI Reference Sequence XM_018812015.1
NCBI Reference Sequence XM_018812016.1
NCBI Reference Sequence XM_018812017.1
NCBI Reference Sequence XM_018812018.1
NCBI Reference Sequence XM_018812019.1
Collections

Gateway full ORF

2 results

cien65208

Plate: VES80_B11

cien124133

Plate: VES89_B17

Gene collection 1 (N. Satoh)

3 results

citb038f16

Plate: R1CiGC32f15

cicl044l16

Plate: R1CiGC13c05

citb069g23

Plate: R1CiGC46o05

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

12 results

IPR Term Analysis Definition
LDLR_classB_rpt ProSiteProfiles LDLR class B repeat
Kringle Pfam Kringle
HYR_dom ProSiteProfiles HYR domain
Kringle_CS ProSitePatterns Kringle, conserved site
LDLR_classB_rpt SMART LDLR class B repeat
Kringle-like SUPERFAMILY Kringle-like fold
Kringle ProSiteProfiles Kringle
Kringle SMART Kringle
6-blade_b-propeller_TolB-like Gene3D Six-bladed beta-propeller, TolB-like
LDLR_classB_rpt Pfam LDLR class B repeat
Kringle_sf Gene3D Kringle superfamily
EGF-like_dom SMART EGF-like domain

GOSlim

38 results

GO Term Annotation Origin Type
receptor binding Blast molecular function
calcium ion binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
early endosome Blast cellular component
endoplasmic reticulum Blast cellular component
Golgi apparatus Blast cellular component
plasma membrane Blast cellular component
cell surface Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
cytoplasmic vesicle Blast cellular component
identical protein binding Blast molecular function
protein homodimerization activity Blast molecular function
neuronal cell body Blast cellular component
membrane raft Blast cellular component
synapse Blast cellular component
synaptic membrane Blast cellular component
membrane organization Blast biological process
organelle organization Blast biological process
macromolecular complex binding Blast molecular function
plasma membrane region Blast cellular component
organelle Blast cellular component
postsynapse Blast cellular component
neuron part Blast cellular component
macromolecular complex Blast cellular component
kinase activity Blast molecular function
enzyme regulator activity Blast molecular function
transmembrane transport Blast biological process
protein kinase binding Blast molecular function
whole membrane Blast cellular component
intracellular organelle part Blast cellular component
bounding membrane of organelle Blast cellular component
cell surface receptor signaling pathway Blast biological process
cell-cell signaling Blast biological process
transmembrane signaling receptor activity Blast molecular function
signaling receptor activity Blast molecular function
plasma membrane part Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

38 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
low-density lipoprotein receptor activity Hs molecular function 136 3.58e-32
receptor binding Hs molecular function 136 3.58e-32
frizzled binding Hs molecular function 136 3.58e-32
calcium ion binding Hs molecular function 122 7.76e-28
protein binding Hs molecular function 136 3.58e-32
extracellular region Hs cellular component 136 3.58e-32
early endosome Hs cellular component 136 3.58e-32
endoplasmic reticulum Hs cellular component 136 3.58e-32
Golgi apparatus Hs cellular component 136 3.58e-32
plasma membrane Hs cellular component 136 3.58e-32
caveola Hs cellular component 136 3.58e-32
cell surface Hs cellular component 136 3.58e-32
postsynaptic density Hs cellular component 122 7.76e-28
membrane Hs cellular component 136 3.58e-32
integral component of membrane Hs cellular component 136 3.58e-32
flotillin complex Hs cellular component 122 7.76e-28
Wnt-protein binding Hs molecular function 136 3.58e-32
kinase inhibitor activity Hs molecular function 136 3.58e-32
toxin transporter activity Hs molecular function 136 3.58e-32
dendrite Hs cellular component 122 7.76e-28
receptor tyrosine kinase binding Hs molecular function 122 7.76e-28
cytoplasmic vesicle Hs cellular component 136 3.58e-32
neuromuscular junction Hs cellular component 122 7.76e-28
early endosome membrane Hs cellular component 136 3.58e-32
apolipoprotein binding Hs molecular function 136 3.58e-32
identical protein binding Hs molecular function 136 3.58e-32
protein homodimerization activity Hs molecular function 136 3.58e-32
Wnt-activated receptor activity Hs molecular function 136 3.58e-32
neuronal cell body Hs cellular component 136 3.58e-32
receptor complex Hs cellular component 136 3.58e-32
membrane raft Hs cellular component 136 3.58e-32
synapse Hs cellular component 136 3.58e-32
coreceptor activity involved in Wnt signaling pathway Hs molecular function 136 3.58e-32
synaptic membrane Hs cellular component 122 7.76e-28
scaffold protein binding Hs molecular function 122 7.76e-28
coreceptor activity involved in canonical Wnt signaling pathway Hs molecular function 136 3.58e-32
Wnt-Frizzled-LRP5/6 complex Hs cellular component 136 3.58e-32
Wnt signalosome Hs cellular component 136 3.58e-32

GO (InterProScan)

No result

GO Term Analysis Type e-value

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