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GENE CARD

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Gene Card

Best human hits

LRP1; LRP1B; LRP4

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00007212

Gene Model ID

KH2012:KH.C5.338

Location

KhC5:4593164..4600866

Transcript Models and Sequences

  KH2012:KH.C5.338.v1.A.ND1-1

External Database Gene Card

External database links

3 results

Database Gene ID
ENSEMBL ENSCING00000012100
ENSEMBL ENSCING00000012101
ENSEMBL ENSCING00000023445
Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
LDLR_classB_rpt ProSiteProfiles LDLR class B repeat
6-blade_b-propeller_TolB-like Gene3D Six-bladed beta-propeller, TolB-like
EGF-like_dom SMART EGF-like domain
Growth_fac_rcpt_cys_sf SUPERFAMILY Growth factor receptor cysteine-rich domain superfamily
LDLR_classB_rpt SMART LDLR class B repeat

GOSlim

45 results

GO Term Annotation Origin Type
RNA binding Blast molecular function
calcium ion binding Blast molecular function
protein binding Blast molecular function
nucleus Blast cellular component
cytoplasm Blast cellular component
lysosomal membrane Blast cellular component
endosome Blast cellular component
early endosome Blast cellular component
plasma membrane Blast cellular component
integral component of plasma membrane Blast cellular component
focal adhesion Blast cellular component
cell surface Blast cellular component
protein transport Blast biological process
membrane Blast cellular component
integral component of membrane Blast cellular component
basolateral plasma membrane Blast cellular component
protein homodimerization activity Blast molecular function
neuronal cell body Blast cellular component
macromolecular complex binding Blast molecular function
metal ion binding Blast molecular function
synaptic membrane Blast cellular component
enzyme binding Blast molecular function
membrane organization Blast biological process
organelle organization Blast biological process
membrane part Blast cellular component
endomembrane system Blast cellular component
organelle Blast cellular component
postsynapse Blast cellular component
neuron part Blast cellular component
plasma membrane region Blast cellular component
membrane raft Blast cellular component
macromolecular complex Blast cellular component
cytoplasmic vesicle Blast cellular component
intracellular organelle part Blast cellular component
whole membrane Blast cellular component
bounding membrane of organelle Blast cellular component
receptor binding Blast molecular function
protein kinase binding Blast molecular function
synapse Blast cellular component
cell surface receptor signaling pathway Blast biological process
cell-cell signaling Blast biological process
transmembrane signaling receptor activity Blast molecular function
anion binding Blast molecular function
carbohydrate derivative binding Blast molecular function
plasma membrane part Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

44 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
protease binding Hs molecular function 95.5 7.02e-20
RNA binding Hs molecular function 95.5 7.02e-20
receptor activity Hs molecular function 95.5 7.02e-20
low-density lipoprotein receptor activity Hs molecular function 95.5 7.02e-20
scavenger receptor activity Hs molecular function 95.5 7.02e-20
calcium ion binding Hs molecular function 101 1.03e-21
protein binding Hs molecular function 101 1.03e-21
nucleus Hs cellular component 95.5 7.02e-20
cytoplasm Hs cellular component 95.5 7.02e-20
lysosomal membrane Hs cellular component 95.5 7.02e-20
endosome Hs cellular component 95.5 7.02e-20
early endosome Hs cellular component 95.5 7.02e-20
plasma membrane Hs cellular component 101 1.03e-21
integral component of plasma membrane Hs cellular component 95.5 7.02e-20
clathrin-coated pit Hs cellular component 95.5 7.02e-20
focal adhesion Hs cellular component 95.5 7.02e-20
cell surface Hs cellular component 101 1.03e-21
postsynaptic density Hs cellular component 101 1.03e-21
membrane Hs cellular component 101 1.03e-21
integral component of membrane Hs cellular component 101 1.03e-21
basolateral plasma membrane Hs cellular component 95.5 7.02e-20
flotillin complex Hs cellular component 101 1.03e-21
alpha-2 macroglobulin receptor activity Hs molecular function 95.5 7.02e-20
Wnt-protein binding Hs molecular function 101 1.03e-21
clathrin-coated vesicle Hs cellular component 95.5 7.02e-20
apolipoprotein receptor activity Hs molecular function 95.5 7.02e-20
dendrite Hs cellular component 101 1.03e-21
endocytic vesicle membrane Hs cellular component 95.5 7.02e-20
receptor tyrosine kinase binding Hs molecular function 101 1.03e-21
neuromuscular junction Hs cellular component 101 1.03e-21
clathrin heavy chain binding Hs molecular function 95.5 7.02e-20
apolipoprotein binding Hs molecular function 101 1.03e-21
protein homodimerization activity Hs molecular function 101 1.03e-21
Wnt-activated receptor activity Hs molecular function 101 1.03e-21
lipoprotein transporter activity Hs molecular function 95.5 7.02e-20
neuronal cell body Hs cellular component 101 1.03e-21
receptor complex Hs cellular component 101 1.03e-21
heparan sulfate proteoglycan binding Hs molecular function 95.5 7.02e-20
macromolecular complex binding Hs molecular function 95.5 7.02e-20
metal ion binding Hs molecular function 95.5 7.02e-20
lipoprotein particle receptor binding Hs molecular function 95.5 7.02e-20
synaptic membrane Hs cellular component 101 1.03e-21
scaffold protein binding Hs molecular function 101 1.03e-21
plasma membrane protein complex Hs cellular component 95.5 7.02e-20

GO (InterProScan)

No result

GO Term Analysis Type e-value

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