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GENE CARD

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Gene Card

Best human hits

FGF17; FGF18; FGF8

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00007390

Gene Model ID

KH2012:KH.C5.5

Location

KhC5:2812423..2824643

Transcript Models and Sequences

  KH2012:KH.C5.5.v1.A.nonSL1-1
KH2012:KH.C5.5.v1.R.nonSL2-1
KH2012:KH.C5.5.v2.A.SL3-1
KH2012:KH.C5.5.v3.A.nonSL4-1
KH2012:KH.C5.5.v3.R.nonSL5-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000009302
NCBI Reference Sequence NM_001032476.1
Collections

Gateway full ORF

1 result

cien134779

Plate: VES91_L09

Gene collection 1 (N. Satoh)

1 result

citb2j4

Plate: R1CiGC28f14

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

1 results

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Fibroblast_GF_fam SMART Fibroblast growth factor family
Fibroblast_GF_fam Pfam Fibroblast growth factor family
Fibroblast_GF_fam PANTHER Fibroblast growth factor family
IL1/FGF SUPERFAMILY Cytokine IL1/FGF

GOSlim

17 results

GO Term Annotation Origin Type
extracellular region Blast cellular component
extracellular space Blast cellular component
intracellular Blast cellular component
nucleolus Blast cellular component
protein kinase activity Blast molecular function
enzyme binding Blast molecular function
molecular function regulator Blast molecular function
receptor binding Blast molecular function
regulation of signal transduction Blast biological process
signaling receptor activity Blast molecular function
plasma membrane part Blast cellular component
cell surface Blast cellular component
phosphotransferase activity, alcohol group as acceptor Blast molecular function
cellular biosynthetic process Blast biological process
kinase activity Blast molecular function
chemotaxis Blast biological process
organic substance metabolic process Blast biological process

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
protein tyrosine kinase activity Hs molecular function 109 6.13e-28
Ras guanyl-nucleotide exchange factor activity Hs molecular function 109 6.13e-28
fibroblast growth factor receptor binding Hs molecular function 109 6.13e-28
type 1 fibroblast growth factor receptor binding Hs molecular function 109 6.13e-28
type 2 fibroblast growth factor receptor binding Hs molecular function 109 6.13e-28
extracellular region Hs cellular component 109 6.13e-28
extracellular space Hs cellular component 109 6.13e-28
intracellular Hs cellular component 100 2.08e-24
nucleolus Hs cellular component 109 6.13e-28
growth factor activity Hs molecular function 109 6.13e-28
external side of plasma membrane Hs cellular component 88.6 4.82e-20
1-phosphatidylinositol-3-kinase activity Hs molecular function 109 6.13e-28
chemoattractant activity Hs molecular function 88.6 4.82e-20
phosphatidylinositol-4,5-bisphosphate 3-kinase activity Hs molecular function 109 6.13e-28

GO (InterProScan)

1 result

GO Term Analysis Type e-value
growth factor activity PANTHER molecular function 3.7E-86

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