Aniseed - Gene card

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000000538
NCBI Reference Sequence	XM_002130059.3

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

ciad043h19

Plate: R1CiGC04p07

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
TSP1_rpt_sf	SUPERFAMILY	Thrombospondin type-1 (TSP1) repeat superfamily
TSP1_rpt	ProSiteProfiles	Thrombospondin type-1 (TSP1) repeat
TSP1_rpt	Pfam	Thrombospondin type-1 (TSP1) repeat
TSP1_rpt_sf	Gene3D	Thrombospondin type-1 (TSP1) repeat superfamily
TSP1_rpt	SMART	Thrombospondin type-1 (TSP1) repeat

GOSlim

33 results

GO Term	Annotation Origin	Type
signal transducer activity	Blast	molecular function
transmembrane signaling receptor activity	Blast	molecular function
G-protein coupled receptor activity	Blast	molecular function
integrin binding	Blast	molecular function
calcium ion binding	Blast	molecular function
protein binding	Blast	molecular function
extracellular region	Blast	cellular component
extracellular space	Blast	cellular component
cytoplasm	Blast	cellular component
endoplasmic reticulum	Blast	cellular component
endoplasmic reticulum lumen	Blast	cellular component
centrosome	Blast	cellular component
plasma membrane	Blast	cellular component
cell surface	Blast	cellular component
membrane	Blast	cellular component
integral component of membrane	Blast	cellular component
cell junction	Blast	cellular component
identical protein binding	Blast	molecular function
extracellular exosome	Blast	cellular component
anion binding	Blast	molecular function
macromolecular complex	Blast	cellular component
extracellular region part	Blast	cellular component
cell periphery	Blast	cellular component
cytoplasmic part	Blast	cellular component
carbohydrate derivative binding	Blast	molecular function
plasma membrane part	Blast	cellular component
cytoplasmic vesicle	Blast	cellular component
endomembrane system	Blast	cellular component
macromolecular complex binding	Blast	molecular function
intracellular organelle part	Blast	cellular component
intracellular organelle lumen	Blast	cellular component
plasma membrane region	Blast	cellular component
binding	Blast	molecular function

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

41 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
phosphatidylserine binding	Hs	molecular function	80.9	1.78e-15
fibronectin binding	Hs	molecular function	80.9	1.78e-15
signal transducer activity	Hs	molecular function	90.9	1.78e-18
transmembrane signaling receptor activity	Hs	molecular function	90.9	1.78e-18
G-protein coupled receptor activity	Hs	molecular function	90.9	1.78e-18
integrin binding	Hs	molecular function	80.9	1.78e-15
calcium ion binding	Hs	molecular function	93.2	3.28e-19
protein binding	Hs	molecular function	90.9	1.78e-18
extracellular region	Hs	cellular component	93.2	3.28e-19
fibrinogen complex	Hs	cellular component	80.9	1.78e-15
proteinaceous extracellular matrix	Hs	cellular component	93.2	3.28e-19
basement membrane	Hs	cellular component	93.2	3.28e-19
extracellular space	Hs	cellular component	80.9	1.78e-15
cytoplasm	Hs	cellular component	93.2	3.28e-19
endoplasmic reticulum	Hs	cellular component	80.9	1.78e-15
endoplasmic reticulum lumen	Hs	cellular component	80.9	1.78e-15
centrosome	Hs	cellular component	90.9	1.78e-18
plasma membrane	Hs	cellular component	90.9	1.78e-18
cell cortex	Hs	cellular component	93.2	3.28e-19
heparin binding	Hs	molecular function	80.9	1.78e-15
external side of plasma membrane	Hs	cellular component	80.9	1.78e-15
cell surface	Hs	cellular component	80.9	1.78e-15
membrane	Hs	cellular component	90.9	1.78e-18
integral component of membrane	Hs	cellular component	90.9	1.78e-18
sarcoplasmic reticulum	Hs	cellular component	80.9	1.78e-15
fibroblast growth factor binding	Hs	molecular function	80.9	1.78e-15
cell junction	Hs	cellular component	93.2	3.28e-19
secretory granule	Hs	cellular component	80.9	1.78e-15
low-density lipoprotein particle binding	Hs	molecular function	80.9	1.78e-15
extracellular matrix	Hs	cellular component	93.2	3.28e-19
platelet alpha granule	Hs	cellular component	80.9	1.78e-15
platelet alpha granule lumen	Hs	cellular component	80.9	1.78e-15
cleavage furrow	Hs	cellular component	93.2	3.28e-19
identical protein binding	Hs	molecular function	80.9	1.78e-15
laminin binding	Hs	molecular function	80.9	1.78e-15
proteoglycan binding	Hs	molecular function	80.9	1.78e-15
transforming growth factor beta binding	Hs	molecular function	80.9	1.78e-15
extracellular matrix binding	Hs	molecular function	80.9	1.78e-15
fibrinogen binding	Hs	molecular function	80.9	1.78e-15
collagen V binding	Hs	molecular function	80.9	1.78e-15
extracellular exosome	Hs	cellular component	93.2	3.28e-19

GO (InterProScan)

No result

GO Term	Analysis	Type	e-value

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences

External database links

Gateway full ORF

cima898134

cima899953

Gene collection 1 (N. Satoh)

ciad043h19

Regulatory Regions

InterPro

GOSlim

GO (Orthology)

GO (Blast)

GO (InterProScan)