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Gene Card

Best human hits

PAFAH2; PLA2G7

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00008164

Gene Model ID

KH2012:KH.C7.328

Location

KhC7:4788254..4790004

Transcript Models and Sequences

  KH2012:KH.C7.328.v1.A.SL1-1

External Database Gene Card

External database links

1 result

Database Gene ID
ENSEMBL ENSCING00000011868
Collections

Gateway full ORF

2 results

cima861713

Plate: VES64_C21

cien136147

Plate: VES91_H14

Gene collection 1 (N. Satoh)

2 results

cieg049a18

Plate: R1CiGC23o14

cieg029a01

Plate: R1CiGC20a12

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
AB_hydrolase Gene3D Alpha/Beta hydrolase fold
AB_hydrolase SUPERFAMILY Alpha/Beta hydrolase fold
PAF_acetylhydro-like PANTHER Platelet-activating factor acetylhydrolase-like
PAF_acetylhydro-like Pfam Platelet-activating factor acetylhydrolase-like
PAF_acetylhydro_eukaryote PIRSF Platelet-activating factor acetylhydrolase, eucaryote

GOSlim

15 results

GO Term Annotation Origin Type
extracellular region Orthology cellular component
extracellular space Orthology cellular component
cytoplasm Orthology cellular component
endoplasmic reticulum Orthology cellular component
endoplasmic reticulum membrane Orthology cellular component
blood coagulation Orthology biological process
membrane Orthology cellular component
hydrolase activity Orthology molecular function
negative regulation of apoptotic process Orthology biological process
anion binding Orthology molecular function
organic substance metabolic process Orthology biological process
macromolecular complex Orthology cellular component
oxidation-reduction process Orthology biological process
cellular metabolic process Orthology biological process
defense response Orthology biological process

GO (Orthology)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
1-alkyl-2-acetylglycerophosphocholine esterase activity Hs molecular function
phospholipid binding Hs molecular function
extracellular region Hs cellular component
extracellular space Hs cellular component
cytoplasm Hs cellular component
endoplasmic reticulum Hs cellular component
endoplasmic reticulum membrane Hs cellular component
lipid metabolic process Hs biological process
blood coagulation Hs biological process
membrane Hs cellular component
lipid catabolic process Hs biological process
hydrolase activity Hs molecular function
hydrolase activity, acting on ester bonds Hs molecular function
low-density lipoprotein particle Hs cellular component
lipid oxidation Hs biological process
negative regulation of apoptotic process Hs biological process
calcium-independent phospholipase A2 activity Hs molecular function
positive regulation of inflammatory response Hs biological process

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
1-alkyl-2-acetylglycerophosphocholine esterase activity Hs molecular function 229 5.26e-71
phospholipid binding Hs molecular function 229 5.26e-71
extracellular region Hs cellular component 229 5.26e-71
extracellular space Hs cellular component 229 5.26e-71
cytoplasm Hs cellular component 229 5.26e-71
endoplasmic reticulum Hs cellular component 213 3.14e-65
endoplasmic reticulum membrane Hs cellular component 213 3.14e-65
membrane Hs cellular component 213 3.14e-65
hydrolase activity Hs molecular function 229 5.26e-71
hydrolase activity, acting on ester bonds Hs molecular function 229 5.26e-71
low-density lipoprotein particle Hs cellular component 229 5.26e-71
calcium-independent phospholipase A2 activity Hs molecular function 229 5.26e-71

GO (InterProScan)

2 results

GO Term Analysis Type e-value
1-alkyl-2-acetylglycerophosphocholine esterase activity Pfam molecular function 2.8E-91
lipid catabolic process Pfam biological process 2.8E-91

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