Aniseed - Gene card

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000002150

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

3 results

cicl094b19

Plate: R1CiGC39h07

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
RRM_dom	SMART	RNA recognition motif domain
Nucleotide-bd_a/b_plait_sf	Gene3D	Nucleotide-binding alpha-beta plait domain superfamily
RRM_dom	ProSiteProfiles	RNA recognition motif domain
RBD_domain_sf	SUPERFAMILY	RNA-binding domain superfamily
RRM_dom	Pfam	RNA recognition motif domain

GOSlim

30 results

GO Term	Annotation Origin	Type
mRNA splicing, via spliceosome	Orthology	biological process
nucleic acid binding	Orthology	molecular function
DNA binding	Orthology	molecular function
RNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
lysosome	Orthology	cellular component
cytosol	Orthology	cellular component
focal adhesion	Blast	cellular component
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
apoptotic process	Orthology	biological process
defense response	Orthology	biological process
protein C-terminus binding	Blast	molecular function
positive regulation of cell proliferation	Orthology	biological process
membrane	Blast	cellular component
extracellular exosome	Orthology	cellular component
gamete generation	Orthology	biological process
cell development	Orthology	biological process
cell surface receptor signaling pathway	Orthology	biological process
cellular response to organic substance	Orthology	biological process
cytoplasmic part	Orthology	cellular component
intracellular non-membrane-bounded organelle	Orthology	cellular component
macromolecular complex	Orthology	cellular component
cell division	Orthology	biological process
negative regulation of gene expression	Orthology	biological process
regulation of gene expression	Orthology	biological process
nuclear part	Orthology	cellular component
positive regulation of gene expression	Blast	biological process

GO (Orthology)

24 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleic acid binding	Hs	molecular function
DNA binding	Hs	molecular function
RNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytoplasm	Hs	cellular component
lysosome	Hs	cellular component
cytosol	Hs	cellular component
regulation of transcription from RNA polymerase II promoter	Hs	biological process
apoptotic process	Hs	biological process
defense response	Hs	biological process
germ cell development	Hs	biological process
poly(A) binding	Hs	molecular function
positive regulation of cell proliferation	Hs	biological process
fibroblast growth factor receptor signaling pathway	Hs	biological process
cytoplasmic stress granule	Hs	cellular component
AU-rich element binding	Hs	molecular function
stem cell division	Hs	biological process
negative regulation of translation	Hs	biological process
intracellular ribonucleoprotein complex	Hs	cellular component
regulation of mRNA splicing, via spliceosome	Hs	biological process
extracellular exosome	Hs	cellular component
nuclear stress granule	Hs	cellular component

GO (Blast)

24 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleic acid binding	Hs	molecular function	327	1.08e-108
DNA binding	Hs	molecular function	325	5.27e-108
RNA binding	Hs	molecular function	327	1.08e-108
mRNA 3'-UTR binding	Hs	molecular function	103	1.51e-23
protein binding	Hs	molecular function	327	1.08e-108
nucleus	Hs	cellular component	327	1.08e-108
nucleoplasm	Hs	cellular component	327	1.08e-108
spliceosomal complex	Hs	cellular component	103	1.51e-23
cytoplasm	Hs	cellular component	327	1.08e-108
lysosome	Hs	cellular component	325	5.27e-108
cytosol	Hs	cellular component	327	1.08e-108
focal adhesion	Hs	cellular component	103	1.51e-23
protein C-terminus binding	Hs	molecular function	103	1.51e-23
poly(A) binding	Hs	molecular function	327	1.08e-108
poly(U) RNA binding	Hs	molecular function	103	1.51e-23
translation activator activity	Hs	molecular function	103	1.51e-23
cytoplasmic stress granule	Hs	cellular component	327	1.08e-108
membrane	Hs	cellular component	103	1.51e-23
AU-rich element binding	Hs	molecular function	327	1.08e-108
intracellular ribonucleoprotein complex	Hs	cellular component	327	1.08e-108
cytoplasmic ribonucleoprotein granule	Hs	cellular component	103	1.51e-23
extracellular exosome	Hs	cellular component	325	5.27e-108
catalytic step 2 spliceosome	Hs	cellular component	103	1.51e-23
nuclear stress granule	Hs	cellular component	327	1.08e-108

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
nucleic acid binding	SUPERFAMILY	molecular function	2.6E-38

Gene Card

Best human hits

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Unique Gene ID

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Transcript Models and Sequences