Aniseed - Gene card

Gene Card

Best human hits

DDRGK1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00008812

Gene Model ID

KH2012:KH.C8.2

Location

KhC8:5005393..5009124

Transcript Models and Sequences

KH2012:KH.C8.2.v1.A.SL6-1
KH2012:KH.C8.2.v2.A.ND7-1
KH2012:KH.C8.2.v2.A.nonSL11-1
KH2012:KH.C8.2.v3.A.SL6-1
KH2012:KH.C8.2.v4.A.SL1-1
KH2012:KH.C8.2.v4.A.SL3-1
KH2012:KH.C8.2.v4.A.SL8-1
KH2012:KH.C8.2.v5.A.SL1-1
KH2012:KH.C8.2.v5.A.SL3-1
KH2012:KH.C8.2.v5.A.SL8-1
KH2012:KH.C8.2.v6.A.nonSL10-1
KH2012:KH.C8.2.v6.A.nonSL9-1
KH2012:KH.C8.2.v6.A.SL4-1
KH2012:KH.C8.2.v6.R.ND2-1
KH2012:KH.C8.2.v7.A.nonSL10-1
KH2012:KH.C8.2.v7.A.nonSL9-1
KH2012:KH.C8.2.v7.A.SL4-1
KH2012:KH.C8.2.v7.R.ND2-1
KH2012:KH.C8.2.v8.A.ND5-1
KH2012:KH.C8.2.v9.A.ND7-1
KH2012:KH.C8.2.v9.A.nonSL11-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000020400
NCBI Reference Sequence	XM_002129863.3

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

ciad028l10

Plate: R1CiGC03j05

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
DDRGK_dom-contain	SMART	DDRGK domain containing protein
DDRGK_dom-contain	Pfam	DDRGK domain containing protein
WH_DNA-bd_sf	SUPERFAMILY	Winged helix DNA-binding domain superfamily
WH-like_DNA-bd_sf	Gene3D	Winged helix-like DNA-binding domain superfamily

GOSlim

24 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
nucleolus	Orthology	cellular component
cytoplasm	Orthology	cellular component
endoplasmic reticulum	Orthology	cellular component
endoplasmic reticulum membrane	Orthology	cellular component
positive regulation of cell proliferation	Orthology	biological process
positive regulation of gene expression	Orthology	biological process
negative regulation of gene expression	Orthology	biological process
negative regulation of apoptotic process	Orthology	biological process
ubiquitin-like protein ligase binding	Orthology	molecular function
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
transcription factor binding	Orthology	molecular function
cell migration	Orthology	biological process
proteolysis	Orthology	biological process
regulation of signal transduction	Orthology	biological process
response to lipid	Orthology	biological process
cellular response to organic substance	Orthology	biological process
cellular response to stress	Orthology	biological process
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
cell cycle G1/S phase transition	Orthology	biological process
metallopeptidase activity	Orthology	molecular function
positive regulation of hydrolase activity	Orthology	biological process
protein localization to endoplasmic reticulum	Orthology	biological process
protein modification by small protein conjugation	Orthology	biological process

GO (Orthology)

22 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA polymerase II repressing transcription factor binding	Hs	molecular function
protein binding	Hs	molecular function
nucleolus	Hs	cellular component
cytoplasm	Hs	cellular component
endoplasmic reticulum	Hs	cellular component
endoplasmic reticulum membrane	Hs	cellular component
positive regulation of cell proliferation	Hs	biological process
positive regulation of gene expression	Hs	biological process
negative regulation of gene expression	Hs	biological process
positive regulation of cell migration	Hs	biological process
positive regulation of proteasomal ubiquitin-dependent protein catabolic process	Hs	biological process
regulation of intracellular estrogen receptor signaling pathway	Hs	biological process
response to endoplasmic reticulum stress	Hs	biological process
negative regulation of apoptotic process	Hs	biological process
ubiquitin-like protein ligase binding	Hs	molecular function
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
positive regulation of NF-kappaB transcription factor activity	Hs	biological process
positive regulation of proteasomal protein catabolic process	Hs	biological process
positive regulation of cell cycle G1/S phase transition	Hs	biological process
positive regulation of metallopeptidase activity	Hs	biological process
positive regulation of protein localization to endoplasmic reticulum	Hs	biological process
protein K69-linked ufmylation	Hs	biological process

GO (Blast)

7 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II repressing transcription factor binding	Hs	molecular function	182	1.98e-55
protein binding	Hs	molecular function	182	1.98e-55
nucleolus	Hs	cellular component	182	1.98e-55
cytoplasm	Hs	cellular component	182	1.98e-55
endoplasmic reticulum	Hs	cellular component	182	1.98e-55
endoplasmic reticulum membrane	Hs	cellular component	182	1.98e-55
ubiquitin-like protein ligase binding	Hs	molecular function	182	1.98e-55

GO (InterProScan)