Login
Help

GENE CARD

Submit your Data

  1. > 

Gene Card

Best human hits

PPP4R2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00009303

Gene Model ID

KH2012:KH.C8.65

Location

KhC8:5951982..5954963

Transcript Models and Sequences

  KH2012:KH.C8.65.v1.A.ND3-1
KH2012:KH.C8.65.v1.A.nonSL4-1
KH2012:KH.C8.65.v1.A.nonSL5-1
KH2012:KH.C8.65.v1.A.SL1-1
KH2012:KH.C8.65.v1.A.SL2-1

External Database Gene Card

External database links

3 results

Database Gene ID
ENSEMBL ENSCING00000001988
ENSEMBL ENSCING00000022868
NCBI Reference Sequence XM_002126757.4
Collections

Gateway full ORF

1 result

cien186332

Plate: VES99_G02

Gene collection 1 (N. Satoh)

2 results

cicl007g09

Plate: R1CiGC09i15

cieg054c21

Plate: R1CiGC24k17

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree
 Click here to see the tree inference method

Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
PPP4R2 PANTHER Protein phosphatase 4 core regulatory subunit R2
PPP4R2 Pfam Protein phosphatase 4 core regulatory subunit R2

GOSlim

17 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
centrosome Orthology cellular component
microtubule organizing center Orthology cellular component
cytoskeleton Orthology cellular component
mRNA processing Orthology biological process
cellular protein modification process Orthology biological process
RNA splicing Orthology biological process
DNA repair Orthology biological process
protein dephosphorylation Orthology biological process
enzyme binding Orthology molecular function
regulation of cellular metabolic process Orthology biological process
enzyme regulator activity Orthology molecular function
intracellular part Orthology cellular component
macromolecular complex Orthology cellular component

GO (Orthology)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
centrosome Hs cellular component
microtubule organizing center Hs cellular component
cytoskeleton Hs cellular component
mRNA processing Hs biological process
cellular protein modification process Hs biological process
RNA splicing Hs biological process
regulation of double-strand break repair via homologous recombination Hs biological process
protein phosphatase regulator activity Hs molecular function
protein phosphatase 4 complex Hs cellular component
protein binding, bridging Hs molecular function
regulation of phosphoprotein phosphatase activity Hs biological process

GO (Blast)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
protein binding Hs molecular function 119 8.39e-30
nucleus Hs cellular component 119 8.39e-30
nucleoplasm Hs cellular component 119 8.39e-30
cytoplasm Hs cellular component 119 8.39e-30
centrosome Hs cellular component 119 8.39e-30
microtubule organizing center Hs cellular component 119 8.39e-30
cytoskeleton Hs cellular component 119 8.39e-30
protein phosphatase regulator activity Hs molecular function 119 8.39e-30
protein phosphatase 4 complex Hs cellular component 119 8.39e-30
protein binding, bridging Hs molecular function 119 8.39e-30

GO (InterProScan)

2 results

GO Term Analysis Type e-value
protein phosphatase regulator activity PANTHER molecular function 1.9E-54
protein phosphatase 4 complex PANTHER cellular component 1.9E-54

Back to Top