Login
Help

GENE CARD

Submit your Data

  1. > 

Gene Card

Best human hits

MED12; MED12L

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00009320

Gene Model ID

KH2012:KH.C8.665

Location

KhC8:3907182..3931092

Transcript Models and Sequences

  KH2012:KH.C8.665.v1.A.SL1-1

External Database Gene Card

External database links

1 result

Database Gene ID
ENSEMBL ENSCING00000007258
Collections

Gateway full ORF

2 results

cien107094

Plate: VES86_L24

cima876755

Plate: VES67_F24

Gene collection 1 (N. Satoh)

4 results

cilv017p15

Plate: R1CiGC26f07

cieg049i07

Plate: R1CiGC23d21

citb029a07

Plate: R1CiGC31k18

citb037g12

Plate: R1CiGC32m04

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree
 Click here to see the tree inference method

Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Mediator_Med12_LCEWAV Pfam Mediator complex, subunit Med12, LCEWAV-domain
Mediator_Med12 Pfam Mediator complex, subunit Med12
Mediator_Med12 SMART Mediator complex, subunit Med12

GOSlim

40 results

GO Term Annotation Origin Type
chromatin binding Orthology molecular function
transcription cofactor activity Orthology molecular function
transcription coactivator activity Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
regulation of transcription from RNA polymerase II promoter Orthology biological process
transcription from RNA polymerase II promoter Orthology biological process
transcription initiation from RNA polymerase II promoter Orthology biological process
heart development Orthology biological process
protein C-terminus binding Orthology molecular function
transcription factor binding Orthology molecular function
membrane Orthology cellular component
protein ubiquitination Orthology biological process
negative regulation of Wnt signaling pathway Orthology biological process
positive regulation of transcription, DNA-templated Orthology biological process
positive regulation of transcription from RNA polymerase II promoter Orthology biological process
intracellular part Orthology cellular component
macromolecular complex Orthology cellular component
RNA polymerase II regulatory region sequence-specific DNA binding Orthology molecular function
anatomical structure formation involved in morphogenesis Orthology biological process
multicellular organism development Orthology biological process
nervous system development Orthology biological process
anatomical structure development Orthology biological process
cell development Orthology biological process
neurogenesis Orthology biological process
central nervous system development Orthology biological process
nucleoplasm part Orthology cellular component
developmental process Orthology biological process
animal organ development Orthology biological process
signal transduction Orthology biological process
response to lipid Orthology biological process
cellular response to organic substance Orthology biological process
anatomical structure morphogenesis Orthology biological process
receptor binding Orthology molecular function
cell surface receptor signaling pathway Orthology biological process
cell-cell signaling Orthology biological process
ubiquitin-protein transferase activity Orthology molecular function

GO (Orthology)

49 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
ubiquitin ligase complex Hs cellular component
RNA polymerase II distal enhancer sequence-specific DNA binding Hs molecular function
RNA polymerase II transcription cofactor activity Hs molecular function
RNA polymerase II transcription coactivator activity Hs molecular function
transcriptional activator activity, RNA polymerase II transcription factor binding Hs molecular function
somitogenesis Hs biological process
neural tube closure Hs biological process
chromatin binding Hs molecular function
transcription cofactor activity Hs molecular function
transcription coactivator activity Hs molecular function
receptor activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
regulation of transcription from RNA polymerase II promoter Hs biological process
transcription from RNA polymerase II promoter Hs biological process
transcription initiation from RNA polymerase II promoter Hs biological process
endoderm development Hs biological process
heart development Hs biological process
beta-catenin binding Hs molecular function
protein C-terminus binding Hs molecular function
transcription factor binding Hs molecular function
oligodendrocyte development Hs biological process
Schwann cell development Hs biological process
membrane Hs cellular component
protein ubiquitination Hs biological process
mediator complex Hs cellular component
stem cell population maintenance Hs biological process
protein domain specific binding Hs molecular function
spinal cord development Hs biological process
neural tube development Hs biological process
negative regulation of Wnt signaling pathway Hs biological process
ligand-dependent nuclear receptor transcription coactivator activity Hs molecular function
intracellular steroid hormone receptor signaling pathway Hs biological process
androgen receptor signaling pathway Hs biological process
post-anal tail morphogenesis Hs biological process
vitamin D receptor binding Hs molecular function
positive regulation of transcription, DNA-templated Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
thyroid hormone receptor binding Hs molecular function
embryonic organ development Hs biological process
embryonic neurocranium morphogenesis Hs biological process
canonical Wnt signaling pathway Hs biological process
Wnt signaling pathway, planar cell polarity pathway Hs biological process
ubiquitin protein ligase activity Hs molecular function
axis elongation involved in somitogenesis Hs biological process
embryonic brain development Hs biological process

GO (Blast)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
ubiquitin ligase complex Hs cellular component 1105 0.0
RNA polymerase II distal enhancer sequence-specific DNA binding Hs molecular function 1105 0.0
RNA polymerase II transcription cofactor activity Hs molecular function 1166 0.0
RNA polymerase II transcription coactivator activity Hs molecular function 1166 0.0
transcriptional activator activity, RNA polymerase II transcription factor binding Hs molecular function 1105 0.0
chromatin binding Hs molecular function 1105 0.0
transcription cofactor activity Hs molecular function 1105 0.0
transcription coactivator activity Hs molecular function 1105 0.0
receptor activity Hs molecular function 1105 0.0
protein binding Hs molecular function 1105 0.0
nucleus Hs cellular component 1166 0.0
nucleoplasm Hs cellular component 1105 0.0
beta-catenin binding Hs molecular function 1166 0.0
protein C-terminus binding Hs molecular function 1105 0.0
transcription factor binding Hs molecular function 1105 0.0
membrane Hs cellular component 1105 0.0
mediator complex Hs cellular component 1166 0.0
protein domain specific binding Hs molecular function 1105 0.0
ligand-dependent nuclear receptor transcription coactivator activity Hs molecular function 1105 0.0
vitamin D receptor binding Hs molecular function 1105 0.0
thyroid hormone receptor binding Hs molecular function 1105 0.0
ubiquitin protein ligase activity Hs molecular function 1105 0.0

GO (InterProScan)

3 results

GO Term Analysis Type e-value
RNA polymerase II transcription cofactor activity SMART molecular function 5.6E-19
regulation of transcription from RNA polymerase II promoter SMART biological process 5.6E-19
mediator complex SMART cellular component 5.6E-19

Back to Top