Aniseed - Gene card

Gene 'KH2012:KH.C8.756'

Gene Card

Best human hits

MRPL16; RAB11FIP1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00009421

Gene Model ID

KH2012:KH.C8.756

Location

KhC8:498445..499289

Transcript Models and Sequences

KH2012:KH.C8.756.v1.A.SL1-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000020946
NCBI Reference Sequence	XM_002127117.4

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cicl024b19

Plate: R1CiGC11m18

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
Ribosomal_L16	PANTHER	Ribosomal protein L16
Ribosomal_L10e/L16	Pfam	Ribosomal protein L10e/L16
Ribosomal_L10e/L16	CDD	Ribosomal protein L10e/L16
Ribosomal_L10e/L16_sf	SUPERFAMILY	Ribosomal protein L10e/L16 superfamily
Ribosomal_L10e/L16_sf	Gene3D	Ribosomal protein L10e/L16 superfamily

GOSlim

17 results

GO Term	Annotation Origin	Type
structural constituent of ribosome	Orthology	molecular function
protein binding	Blast	molecular function
cytoplasm	Blast	cellular component
mitochondrion	Orthology	cellular component
mitochondrial inner membrane	Orthology	cellular component
endosome	Blast	cellular component
cytosol	Blast	cellular component
ribosome	Orthology	cellular component
membrane	Blast	cellular component
cytoplasmic vesicle	Blast	cellular component
intracellular membrane-bounded organelle	Blast	cellular component
mitochondrial matrix	Orthology	cellular component
RNA binding	Orthology	molecular function
enzyme binding	Blast	molecular function
intracellular organelle part	Blast	cellular component
whole membrane	Blast	cellular component
bounding membrane of organelle	Blast	cellular component

GO (Orthology)

11 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
structural constituent of ribosome	Hs	molecular function
mitochondrion	Hs	cellular component
mitochondrial inner membrane	Hs	cellular component
mitochondrial large ribosomal subunit	Hs	cellular component
ribosome	Hs	cellular component
translation	Hs	biological process
rRNA binding	Hs	molecular function
intracellular ribonucleoprotein complex	Hs	cellular component
mitochondrial translation	Hs	biological process
mitochondrial translational elongation	Hs	biological process
mitochondrial translational termination	Hs	biological process

GO (Blast)