Aniseed - Gene card

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Gene 'KH2012:KH.C9.516'

Gene Card

Best human hits

CTRB1; CTRB2; CTRL

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00010069

Gene Model ID

KH2012:KH.C9.516

Location

KhC9:4567055..4569528

Transcript Models and Sequences

KH2012:KH.C9.516.v1.A.nonSL2-1
KH2012:KH.C9.516.v1.A.nonSL3-1
KH2012:KH.C9.516.v1.R.ND1-1

External Database Gene Card

External database links

1 result

Database	Gene ID
NCBI Reference Sequence	XM_002129354.4

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

ciht042n02

Plate: R1CiGC44a02

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
Trypsin_dom	ProSiteProfiles	Serine proteases, trypsin domain
Peptidase_S1A	PRINTS	Peptidase S1A, chymotrypsin family
Peptidase_S1_PA	SUPERFAMILY	Peptidase S1, PA clan
TRYPSIN_SER	ProSitePatterns	Serine proteases, trypsin family, serine active site
Trypsin_dom	Pfam	Serine proteases, trypsin domain
Trypsin_dom	SMART	Serine proteases, trypsin domain
Trypsin_dom	CDD	Serine proteases, trypsin domain

GOSlim

8 results

GO Term	Annotation Origin	Type
serine-type endopeptidase activity	Orthology	molecular function
extracellular region	Orthology	cellular component
extracellular space	Orthology	cellular component
proteolysis	Orthology	biological process
peptidase activity	Orthology	molecular function
serine-type peptidase activity	Orthology	molecular function
hydrolase activity	Orthology	molecular function
cellular aromatic compound metabolic process	Orthology	biological process

GO (Orthology)

10 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
serine-type endopeptidase activity	Hs	molecular function
extracellular region	Hs	cellular component
extracellular space	Hs	cellular component
proteolysis	Hs	biological process
digestion	Hs	biological process
peptidase activity	Hs	molecular function
serine-type peptidase activity	Hs	molecular function
cobalamin metabolic process	Hs	biological process
hydrolase activity	Hs	molecular function
multicellular organismal protein catabolic process	Hs	biological process

GO (Blast)

6 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
serine-type endopeptidase activity	Hs	molecular function	153	1.74e-45
extracellular region	Hs	cellular component	149	3.50e-44
extracellular space	Hs	cellular component	153	1.74e-45
peptidase activity	Hs	molecular function	153	1.74e-45
serine-type peptidase activity	Hs	molecular function	153	1.74e-45
hydrolase activity	Hs	molecular function	153	1.74e-45

GO (InterProScan)