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Gene Card

Best human hits

RASSF1; RASSF3; RASSF5

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00010676

Gene Model ID

KH2012:KH.L11.7

Location

KhL11:39946..42596

Transcript Models and Sequences

  KH2012:KH.L11.7.v1.C.ND1-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000001622
NCBI Reference Sequence XM_009862692.2
Collections

Gateway full ORF

2 results

cima862704

Plate: VES65_L04

cima8101163

Plate: VES72_G24

Gene collection 1 (N. Satoh)

1 result

cieg038l09

Plate: R1CiGC21p05

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

12 results

IPR Term Analysis Definition
RA_dom SMART Ras-associating (RA) domain
PE/DAG-bd Pfam Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
RA_dom Pfam Ras-associating (RA) domain
C-RASSF PANTHER C-terminal RASSF family
Ubiquitin-like_domsf SUPERFAMILY Ubiquitin-like domain superfamily
PE/DAG-bd ProSitePatterns Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
PE/DAG-bd SMART Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
PE/DAG-bd ProSiteProfiles Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
SARAH_dom ProSiteProfiles SARAH domain
PE/DAG-bd CDD Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
SARAH_dom Pfam SARAH domain
RA_dom ProSiteProfiles Ras-associating (RA) domain

GOSlim

26 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
intracellular Orthology cellular component
nucleus Orthology cellular component
cytoplasm Orthology cellular component
microtubule organizing center Orthology cellular component
cytosol Orthology cellular component
cytoskeleton Orthology cellular component
microtubule Orthology cellular component
plasma membrane Orthology cellular component
apoptotic process Orthology biological process
cell cycle Orthology biological process
signal transduction Orthology biological process
zinc ion binding Orthology molecular function
negative regulation of cell proliferation Orthology biological process
microtubule cytoskeleton Orthology cellular component
intracellular signal transduction Orthology biological process
identical protein binding Orthology molecular function
regulation of apoptotic process Orthology biological process
metal ion binding Orthology molecular function
cytoskeletal part Orthology cellular component
small GTPase mediated signal transduction Orthology biological process
enzyme binding Orthology molecular function
protein ubiquitination Orthology biological process
microtubule-based process Orthology biological process
organelle organization Orthology biological process
protein localization to organelle Orthology biological process

GO (Orthology)

27 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
spindle pole Hs cellular component
protein binding Hs molecular function
intracellular Hs cellular component
nucleus Hs cellular component
cytoplasm Hs cellular component
microtubule organizing center Hs cellular component
spindle Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
microtubule Hs cellular component
plasma membrane Hs cellular component
apoptotic process Hs biological process
cell cycle Hs biological process
cell cycle arrest Hs biological process
signal transduction Hs biological process
Ras protein signal transduction Hs biological process
zinc ion binding Hs molecular function
negative regulation of cell proliferation Hs biological process
microtubule cytoskeleton Hs cellular component
Ras GTPase binding Hs molecular function
positive regulation of protein ubiquitination Hs biological process
intracellular signal transduction Hs biological process
identical protein binding Hs molecular function
regulation of apoptotic process Hs biological process
metal ion binding Hs molecular function
regulation of microtubule cytoskeleton organization Hs biological process
regulation of protein localization to nucleus Hs biological process

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
spindle pole Hs cellular component 172 2.04e-51
protein binding Hs molecular function 181 9.20e-54
intracellular Hs cellular component 181 9.20e-54
nucleus Hs cellular component 181 9.20e-54
cytoplasm Hs cellular component 181 9.20e-54
microtubule organizing center Hs cellular component 172 2.04e-51
spindle Hs cellular component 172 2.04e-51
cytosol Hs cellular component 117 1.56e-31
cytoskeleton Hs cellular component 181 9.20e-54
microtubule Hs cellular component 181 9.20e-54
plasma membrane Hs cellular component 117 1.56e-31
zinc ion binding Hs molecular function 172 2.04e-51
microtubule cytoskeleton Hs cellular component 172 2.04e-51
Ras GTPase binding Hs molecular function 181 9.20e-54
identical protein binding Hs molecular function 117 1.56e-31
metal ion binding Hs molecular function 181 9.20e-54

GO (InterProScan)

2 results

GO Term Analysis Type e-value
signal transduction Pfam biological process 1.4E-12
intracellular signal transduction CDD biological process 2.22669E-9

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