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GENE CARD

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Gene Card

Best human hits

FBN1; MATN2; MEGF6

Unique Gene ID

Cirobu.g00011055

Gene Model ID

KH2012:KH.L132.4

Location

KhL132:107490..110984

Transcript Models and Sequences

  KH2012:KH.L132.4.v1.A.ND1-1

External Database Gene Card
Collections

Gateway full ORF

2 results

cima892832

Plate: VES71_E05

cima8102923

Plate: VES73_B12

Gene collection 1 (N. Satoh)

1 result

cilv038i02

Plate: R1CiGC28k23

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
EGF-type_Asp/Asn_hydroxyl_site ProSitePatterns EGF-type aspartate/asparagine hydroxylation site
EGF-like_dom ProSiteProfiles EGF-like domain
EGF_Ca-bd_CS ProSitePatterns EGF-like calcium-binding, conserved site
Cystine-knot_cytokine SUPERFAMILY Cystine-knot cytokine
cEGF Pfam Complement Clr-like EGF domain
EGF-like_Ca-bd_dom SMART EGF-like calcium-binding domain
Growth_fac_rcpt_cys_sf SUPERFAMILY Growth factor receptor cysteine-rich domain superfamily
EGF-like_CS ProSitePatterns EGF-like, conserved site
EGF-like_dom SMART EGF-like domain

GOSlim

17 results

GO Term Annotation Origin Type
integrin binding Blast molecular function
calcium ion binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
endoplasmic reticulum lumen Blast cellular component
identical protein binding Blast molecular function
macromolecular complex binding Blast molecular function
extracellular exosome Blast cellular component
extracellular region part Blast cellular component
receptor binding Blast molecular function
molecular function regulator Blast molecular function
regulation of signal transduction Blast biological process
signaling receptor activity Blast molecular function
structural molecule activity Blast molecular function
anion binding Blast molecular function
carbohydrate derivative binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
microfibril Hs cellular component 141 8.44e-36
integrin binding Hs molecular function 141 8.44e-36
hormone activity Hs molecular function 141 8.44e-36
extracellular matrix structural constituent Hs molecular function 141 8.44e-36
calcium ion binding Hs molecular function 163 3.63e-43
protein binding Hs molecular function 163 3.63e-43
extracellular region Hs cellular component 163 3.63e-43
proteinaceous extracellular matrix Hs cellular component 163 3.64e-43
basement membrane Hs cellular component 163 3.64e-43
extracellular space Hs cellular component 163 3.64e-43
endoplasmic reticulum lumen Hs cellular component 141 8.44e-36
heparin binding Hs molecular function 141 8.44e-36
extracellular matrix constituent conferring elasticity Hs molecular function 141 8.44e-36
extracellular matrix Hs cellular component 163 3.64e-43
identical protein binding Hs molecular function 141 8.44e-36
macromolecular complex binding Hs molecular function 141 8.44e-36
extracellular exosome Hs cellular component 141 8.44e-36

GO (InterProScan)

1 result

GO Term Analysis Type e-value
calcium ion binding SMART molecular function 7.1E-8