Gene Card
Best human hits
GPATCH2; GPATCH2L; RBM5
Unique Gene ID
Cirobu.g00011658
Gene Model ID
KH2012:KH.L16.3
Location
KhL16:25085..30998
Transcript Models and Sequences
KH2012:KH.L16.3.v1.A.SL1-1
KH2012:KH.L16.3.v1.A.SL2-1
KH2012:KH.L16.3.v1.A.SL3-1
External database links
1 result
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000022585 |
Gateway full ORF
2 results
cien38573
Plate: VES76_F11
cima856199
Plate: VES63_H22
Gene collection 1 (N. Satoh)
1 result
cicl005i04
Plate: R1CiGC08j12
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
4 results
| IPR Term | Analysis | Definition |
|---|---|---|
| G_patch_dom | SMART | G-patch domain |
| G_patch_dom | Pfam | G-patch domain |
| G_patch_dom | ProSiteProfiles | G-patch domain |
| Gpatch2 | PANTHER | G patch domain-containing protein 2 |
GOSlim
11 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| nucleic acid binding | Blast | molecular function |
| DNA binding | Blast | molecular function |
| RNA binding | Blast | molecular function |
| protein binding | Blast | molecular function |
| nucleus | Blast | cellular component |
| nucleoplasm | Blast | cellular component |
| nucleolus | Blast | cellular component |
| nuclear speck | Blast | cellular component |
| metal ion binding | Blast | molecular function |
| nuclear part | Blast | cellular component |
| macromolecular complex | Blast | cellular component |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
11 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nucleic acid binding | Hs | molecular function | 65.5 | 9.02e-12 |
| DNA binding | Hs | molecular function | 48.9 | 2.23e-06 |
| RNA binding | Hs | molecular function | 48.9 | 2.23e-06 |
| mRNA binding | Hs | molecular function | 48.9 | 2.23e-06 |
| protein binding | Hs | molecular function | 68.6 | 6.77e-13 |
| nucleus | Hs | cellular component | 65.5 | 9.02e-12 |
| nucleoplasm | Hs | cellular component | 48.9 | 2.23e-06 |
| spliceosomal complex | Hs | cellular component | 48.9 | 2.23e-06 |
| nucleolus | Hs | cellular component | 65.5 | 9.02e-12 |
| nuclear speck | Hs | cellular component | 65.5 | 9.02e-12 |
| metal ion binding | Hs | molecular function | 48.9 | 2.23e-06 |
GO (InterProScan)
1 result
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleic acid binding | Pfam | molecular function | 2.1E-16 |
