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GENE CARD

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Gene Card

Best human hits

MIER1; MIER2; MIER3

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00011798

Gene Model ID

KH2012:KH.L170.60

Location

KhL170:412955..420330

Transcript Models and Sequences

  KH2012:KH.L170.60.v1.A.ND2-1
KH2012:KH.L170.60.v1.A.SL1-1
KH2012:KH.L170.60.v1.A.SL4-1
KH2012:KH.L170.60.v2.A.SL3-1

External Database Gene Card

External database links

1 result

Database Gene ID
ENSEMBL ENSCING00000000352
Collections

Gateway full ORF

2 results

cien113030

Plate: VES88_L03

cien125480

Plate: VES89_E22

Gene collection 1 (N. Satoh)

1 result

cicl020i13

Plate: R1CiGC11e05

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
SANT_dom ProSiteProfiles SANT domain
ELM2_dom SMART ELM2 domain
SANT/Myb SMART SANT/Myb domain
Homeobox-like_sf SUPERFAMILY Homeobox-like domain superfamily
ELM2_dom ProSiteProfiles ELM2 domain

GOSlim

20 results

GO Term Annotation Origin Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding Orthology molecular function
DNA binding Orthology molecular function
signal transducer activity Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
regulation of transcription from RNA polymerase II promoter Orthology biological process
signal transduction Orthology biological process
macromolecular complex Orthology cellular component
organelle organization Orthology biological process
hydrolase activity Orthology molecular function
cellular protein modification process Orthology biological process
negative regulation of transcription, DNA-templated Orthology biological process
enzyme binding Orthology molecular function
transcription factor activity, sequence-specific DNA binding Orthology molecular function
intracellular signal transduction Orthology biological process
positive regulation of signal transduction Orthology biological process

GO (Orthology)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
DNA binding Hs molecular function
histone deacetylase activity Hs molecular function
signal transducer activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
regulation of transcription from RNA polymerase II promoter Hs biological process
signal transduction Hs biological process
histone deacetylation Hs biological process
transcriptional repressor complex Hs cellular component
positive regulation of chromatin silencing Hs biological process
macromolecular complex Hs cellular component
histone deacetylase binding Hs molecular function
positive regulation of I-kappaB kinase/NF-kappaB signaling Hs biological process

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 230 1.31e-67
DNA binding Hs molecular function 230 1.31e-67
histone deacetylase activity Hs molecular function 230 1.31e-67
signal transducer activity Hs molecular function 230 1.31e-67
protein binding Hs molecular function 230 1.31e-67
nucleus Hs cellular component 230 1.31e-67
nucleoplasm Hs cellular component 230 1.31e-67
cytoplasm Hs cellular component 230 1.31e-67
transcriptional repressor complex Hs cellular component 230 1.31e-67
macromolecular complex Hs cellular component 230 1.31e-67
histone deacetylase binding Hs molecular function 230 1.31e-67

GO (InterProScan)

1 result

GO Term Analysis Type e-value
DNA binding SUPERFAMILY molecular function 4.64E-12

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