Aniseed - Gene card

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Gene 'KH2012:KH.L37.15'

Gene Card

Best human hits

PYCR1; PYCR2; PYCR3

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00012376

Gene Model ID

KH2012:KH.L37.15

Location

KhL37:299528..303778

Transcript Models and Sequences

KH2012:KH.L37.15.v1.A.SL1-1
KH2012:KH.L37.15.v1.A.SL3-1
KH2012:KH.L37.15.v1.A.SL4-1
KH2012:KH.L37.15.v2.A.SL2-1

External Database Gene Card

External database links

1 result

Database	Gene ID
NCBI Reference Sequence	XM_002131157.4

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg055a01

Plate: R1CiGC24g04

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
Pyrroline-COOH_reductase	TIGRFAM	Pyrroline-5-carboxylate reductase
Pyrroline-COOH_reductase	Hamap	Pyrroline-5-carboxylate reductase
NAD(P)-bd_dom_sf	SUPERFAMILY	NAD(P)-binding domain superfamily
6-PGluconate_DH-like_C_sf	SUPERFAMILY	6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily
P5CR_dimer	Pfam	Pyrroline-5-carboxylate reductase, dimerisation domain
P5C_Rdtase_cat_N	Pfam	Pyrroline-5-carboxylate reductase, catalytic, N-terminal
Pyrroline-COOH_reductase	PIRSF	Pyrroline-5-carboxylate reductase

GOSlim

12 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
cytoplasm	Orthology	cellular component
mitochondrion	Orthology	cellular component
mitochondrial matrix	Orthology	cellular component
cytosol	Blast	cellular component
identical protein binding	Orthology	molecular function
oxidation-reduction process	Orthology	biological process
catalytic activity	Orthology	molecular function
cellular biosynthetic process	Orthology	biological process
cellular response to stress	Orthology	biological process
response to oxidative stress	Orthology	biological process
negative regulation of cell death	Orthology	biological process

GO (Orthology)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
pyrroline-5-carboxylate reductase activity	Hs	molecular function
protein binding	Hs	molecular function
cytoplasm	Hs	cellular component
mitochondrion	Hs	cellular component
mitochondrial matrix	Hs	cellular component
proline biosynthetic process	Hs	biological process
cellular amino acid biosynthetic process	Hs	biological process
oxidoreductase activity	Hs	molecular function
cellular response to oxidative stress	Hs	biological process
identical protein binding	Hs	molecular function
regulation of mitochondrial membrane potential	Hs	biological process
oxidation-reduction process	Hs	biological process
L-proline biosynthetic process	Hs	biological process
negative regulation of hydrogen peroxide-induced cell death	Hs	biological process

GO (Blast)

8 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
pyrroline-5-carboxylate reductase activity	Hs	molecular function	328	2.45e-112
protein binding	Hs	molecular function	327	8.51e-112
cytoplasm	Hs	cellular component	328	2.45e-112
mitochondrion	Hs	cellular component	328	2.45e-112
mitochondrial matrix	Hs	cellular component	328	2.45e-112
cytosol	Hs	cellular component	228	1.67e-73
oxidoreductase activity	Hs	molecular function	328	2.45e-112
identical protein binding	Hs	molecular function	327	8.51e-112

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
pyrroline-5-carboxylate reductase activity	PIRSF	molecular function	6.2E-82
proline biosynthetic process	PIRSF	biological process	6.2E-82
oxidation-reduction process	PIRSF	biological process	6.2E-82