Aniseed - Gene card

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000005603

Collections

Gateway full ORF

2 results

cien174443

Plate: VES97_A07

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
CNH_dom	Pfam	Citron homology (CNH) domain
Clathrin_H-chain/VPS_repeat	Pfam	Clathrin, heavy chain/VPS, 7-fold repeat
Clathrin_H-chain/VPS_repeat	ProSiteProfiles	Clathrin, heavy chain/VPS, 7-fold repeat
Vam6/VPS39/TRAP1	PANTHER	Vam6/VPS39/TRAP1 family
VPS39/TGF_beta_rcpt-assoc_2	Pfam	Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 2
CNH_dom	ProSiteProfiles	Citron homology (CNH) domain

GOSlim

32 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
intracellular	Blast	cellular component
cytoplasm	Orthology	cellular component
lysosome	Blast	cellular component
lysosomal membrane	Blast	cellular component
endosome	Orthology	cellular component
early endosome	Orthology	cellular component
Golgi apparatus	Blast	cellular component
regulation of transcription, DNA-templated	Orthology	biological process
intracellular protein transport	Orthology	biological process
signal transduction	Orthology	biological process
microtubule binding	Blast	molecular function
protein transport	Orthology	biological process
microtubule cytoskeleton	Blast	cellular component
membrane	Orthology	cellular component
cytoplasmic vesicle	Blast	cellular component
identical protein binding	Blast	molecular function
intracellular membrane-bounded organelle	Orthology	cellular component
metal ion binding	Blast	molecular function
intracellular transport	Orthology	biological process
receptor binding	Orthology	molecular function
cell surface receptor signaling pathway	Orthology	biological process
cellular response to organic substance	Orthology	biological process
intracellular organelle part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
membrane organization	Orthology	biological process
organelle organization	Orthology	biological process
whole membrane	Blast	cellular component
bounding membrane of organelle	Blast	cellular component
cytoplasmic part	Blast	cellular component
membrane part	Blast	cellular component
enzyme binding	Blast	molecular function

GO (Orthology)

17 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
transforming growth factor beta receptor binding	Hs	molecular function
protein binding	Hs	molecular function
cytoplasm	Hs	cellular component
endosome	Hs	cellular component
early endosome	Hs	cellular component
regulation of transcription, DNA-templated	Hs	biological process
intracellular protein transport	Hs	biological process
signal transduction	Hs	biological process
transforming growth factor beta receptor signaling pathway	Hs	biological process
endosome to lysosome transport	Hs	biological process
protein transport	Hs	biological process
membrane	Hs	cellular component
vesicle-mediated transport	Hs	biological process
CORVET complex	Hs	cellular component
endosomal vesicle fusion	Hs	biological process
intracellular membrane-bounded organelle	Hs	cellular component
SMAD binding	Hs	molecular function

GO (Blast)

28 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
transforming growth factor beta receptor binding	Hs	molecular function	572	0.0
protein binding	Hs	molecular function	572	0.0
intracellular	Hs	cellular component	174	6.16e-45
cytoplasm	Hs	cellular component	572	0.0
lysosome	Hs	cellular component	174	6.16e-45
lysosomal membrane	Hs	cellular component	174	6.16e-45
endosome	Hs	cellular component	572	0.0
early endosome	Hs	cellular component	572	0.0
late endosome	Hs	cellular component	174	6.16e-45
Golgi apparatus	Hs	cellular component	39.7	0.008
Golgi-associated vesicle	Hs	cellular component	39.7	0.008
microtubule binding	Hs	molecular function	39.7	0.008
endosome membrane	Hs	cellular component	39.7	0.008
microtubule cytoskeleton	Hs	cellular component	39.7	0.008
membrane	Hs	cellular component	572	0.0
AP-3 adaptor complex	Hs	cellular component	174	6.16e-45
clathrin-coated vesicle	Hs	cellular component	39.7	0.008
HOPS complex	Hs	cellular component	174	6.16e-45
cytoplasmic vesicle	Hs	cellular component	39.7	0.008
late endosome membrane	Hs	cellular component	174	6.16e-45
CORVET complex	Hs	cellular component	572	0.0
identical protein binding	Hs	molecular function	39.7	0.008
intracellular membrane-bounded organelle	Hs	cellular component	572	0.0
protein self-association	Hs	molecular function	39.7	0.008
SMAD binding	Hs	molecular function	572	0.0
metal ion binding	Hs	molecular function	39.7	0.008
GTPase binding	Hs	molecular function	39.7	0.008
clathrin complex	Hs	cellular component	39.7	0.008

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
intracellular protein transport	Pfam	biological process	1.1E-7
vesicle-mediated transport	PANTHER	biological process	5.8E-168

Gene Card

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