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GENE CARD

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Gene Card

Best human hits

CNTN5; HMCN2; SIGLEC10

Unique Gene ID

Cirobu.g00012758

Gene Model ID

KH2012:KH.L52.2

Location

KhL52:700..5048

External Database Gene Card

External database links

No result

Collections

Gateway full ORF

2 results

cien129893

Plate: VES90_G16

cien222836

Plate: VES104_P18

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Ig-like_fold Gene3D Immunoglobulin-like fold
Myelin_P0-rel PANTHER Myelin P0 protein-related
Sushi_SCR_CCP_dom ProSiteProfiles Sushi/SCR/CCP domain
Ig_sub SMART Immunoglobulin subtype
Ig-like_dom ProSiteProfiles Immunoglobulin-like domain
Ig-like_dom_sf SUPERFAMILY Immunoglobulin-like domain superfamily

GOSlim

15 results

GO Term Annotation Origin Type
calcium ion binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
cytosol Blast cellular component
plasma membrane Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
cell junction Blast cellular component
extracellular region part Blast cellular component
cell periphery Blast cellular component
cytoplasmic part Blast cellular component
enzyme binding Blast molecular function
binding Blast molecular function
intrinsic component of membrane Blast cellular component
plasma membrane region Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
calcium ion binding Hs molecular function 45.1 1.12e-04
protein binding Hs molecular function 43.5 3.09e-04
extracellular region Hs cellular component 45.1 1.12e-04
proteinaceous extracellular matrix Hs cellular component 45.1 1.12e-04
basement membrane Hs cellular component 45.1 1.12e-04
cytosol Hs cellular component 43.5 3.09e-04
plasma membrane Hs cellular component 43.5 3.09e-04
cell cortex Hs cellular component 45.1 1.12e-04
membrane Hs cellular component 45.1 1.12e-04
integral component of membrane Hs cellular component 42.7 4.65e-04
phosphatase binding Hs molecular function 42.7 4.65e-04
cell junction Hs cellular component 45.1 1.12e-04
carbohydrate binding Hs molecular function 42.7 4.65e-04
extracellular matrix Hs cellular component 45.1 1.12e-04
anchored component of membrane Hs cellular component 43.5 3.09e-04
cleavage furrow Hs cellular component 45.1 1.12e-04
SH2 domain binding Hs molecular function 42.7 4.65e-04

GO (InterProScan)

1 result

GO Term Analysis Type e-value
membrane PANTHER cellular component 8.9E-68