Aniseed - Gene card

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000002563
NCBI Reference Sequence	XM_002122499.4

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cibd072p09

Plate: R1CiGC38j12

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

11 results

IPR Term	Analysis	Definition
DNA_mismatch_repair_CS	ProSitePatterns	DNA mismatch repair, conserved site
HATPase_C_sf	Gene3D	Histidine kinase/HSP90-like ATPase superfamily
Mlh1_C	Pfam	DNA mismatch repair protein Mlh1, C-terminal
DNA_mismatch_repair_MLH1	PANTHER	DNA mismatch repair protein Mlh1
HATPase_C	CDD	Histidine kinase/HSP90-like ATPase
DNA_mismatch_repair_C	Pfam	DNA mismatch repair protein, C-terminal
HATPase_C_sf	SUPERFAMILY	Histidine kinase/HSP90-like ATPase superfamily
Ribosomal_S5_D2-typ_fold	SUPERFAMILY	Ribosomal protein S5 domain 2-type fold
DNA_mismatch_repair_C	SMART	DNA mismatch repair protein, C-terminal
DNA_mismatch_repair_fam	TIGRFAM	DNA mismatch repair protein family
Ribosomal_S5_D2-typ_fold_subgr	Gene3D	Ribosomal protein S5 domain 2-type fold, subgroup

GOSlim

37 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
DNA binding	Orthology	molecular function
chromatin binding	Orthology	molecular function
protein binding	Orthology	molecular function
ATP binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytosol	Blast	cellular component
plasma membrane	Blast	cellular component
DNA repair	Orthology	biological process
cellular response to DNA damage stimulus	Orthology	biological process
cell cycle	Orthology	biological process
spermatogenesis	Orthology	biological process
microtubule cytoskeleton	Blast	cellular component
membrane	Orthology	cellular component
hydrolase activity	Blast	molecular function
nuclear-transcribed mRNA catabolic process	Orthology	biological process
reproductive process	Orthology	biological process
DNA metabolic process	Orthology	biological process
intracellular non-membrane-bounded organelle	Orthology	cellular component
nuclear lumen	Orthology	cellular component
male gamete generation	Orthology	biological process
intracellular signal transduction	Orthology	biological process
apoptotic process	Orthology	biological process
gamete generation	Orthology	biological process
system development	Orthology	biological process
immune system process	Orthology	biological process
nucleoside-triphosphatase activity	Orthology	molecular function
double-stranded DNA binding	Orthology	molecular function
intracellular part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
nuclear part	Orthology	cellular component
macromolecular complex binding	Orthology	molecular function
immune response	Orthology	biological process
cell development	Orthology	biological process
microtubule-based process	Orthology	biological process
cytoplasmic part	Blast	cellular component

GO (Orthology)

45 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
nuclear-transcribed mRNA poly(A) tail shortening	Hs	biological process
resolution of meiotic recombination intermediates	Hs	biological process
condensed chromosome	Hs	cellular component
condensed nuclear chromosome	Hs	cellular component
synaptonemal complex	Hs	cellular component
male germ cell nucleus	Hs	cellular component
chromatin binding	Hs	molecular function
single-stranded DNA binding	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
chromosome	Hs	cellular component
chiasma	Hs	cellular component
late recombination nodule	Hs	cellular component
DNA repair	Hs	biological process
mismatch repair	Hs	biological process
double-strand break repair via nonhomologous end joining	Hs	biological process
cellular response to DNA damage stimulus	Hs	biological process
cell cycle	Hs	biological process
male meiosis chromosome segregation	Hs	biological process
synapsis	Hs	biological process
reciprocal meiotic recombination	Hs	biological process
male meiotic nuclear division	Hs	biological process
spermatogenesis	Hs	biological process
intrinsic apoptotic signaling pathway in response to DNA damage	Hs	biological process
membrane	Hs	cellular component
female meiosis chromosome segregation	Hs	biological process
somatic hypermutation of immunoglobulin genes	Hs	biological process
ATPase activity	Hs	molecular function
mismatched DNA binding	Hs	molecular function
guanine/thymine mispair binding	Hs	molecular function
mismatch repair complex	Hs	cellular component
MutLalpha complex	Hs	cellular component
MutSalpha complex binding	Hs	molecular function
meiotic metaphase I plate congression	Hs	biological process
meiotic chromosome segregation	Hs	biological process
meiotic telomere clustering	Hs	biological process
homologous chromosome segregation	Hs	biological process
isotype switching	Hs	biological process
negative regulation of mitotic recombination	Hs	biological process
oogenesis	Hs	biological process
meiotic spindle midzone assembly	Hs	biological process
meiotic cell cycle	Hs	biological process

GO (Blast)

30 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	747	0.0
condensed chromosome	Hs	cellular component	747	0.0
condensed nuclear chromosome	Hs	cellular component	747	0.0
synaptonemal complex	Hs	cellular component	747	0.0
male germ cell nucleus	Hs	cellular component	747	0.0
DNA binding	Hs	molecular function	147	1.24e-36
chromatin binding	Hs	molecular function	747	0.0
single-stranded DNA binding	Hs	molecular function	747	0.0
nuclease activity	Hs	molecular function	147	1.24e-36
endonuclease activity	Hs	molecular function	147	1.24e-36
protein binding	Hs	molecular function	747	0.0
ATP binding	Hs	molecular function	747	0.0
nucleus	Hs	cellular component	747	0.0
nucleoplasm	Hs	cellular component	747	0.0
chromosome	Hs	cellular component	747	0.0
chiasma	Hs	cellular component	747	0.0
late recombination nodule	Hs	cellular component	747	0.0
cytosol	Hs	cellular component	147	1.24e-36
plasma membrane	Hs	cellular component	147	1.24e-36
microtubule cytoskeleton	Hs	cellular component	147	1.24e-36
membrane	Hs	cellular component	747	0.0
hydrolase activity	Hs	molecular function	147	1.24e-36
ATPase activity	Hs	molecular function	747	0.0
mismatched DNA binding	Hs	molecular function	747	0.0
guanine/thymine mispair binding	Hs	molecular function	747	0.0
single base insertion or deletion binding	Hs	molecular function	147	1.24e-36
mismatch repair complex	Hs	cellular component	747	0.0
MutLalpha complex	Hs	cellular component	747	0.0
MutSalpha complex binding	Hs	molecular function	747	0.0
cytoplasmic ribonucleoprotein granule	Hs	cellular component	147	1.24e-36

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
ATP binding	TIGRFAM	molecular function	1.9E-101
mismatch repair	PANTHER	biological process	1.5E-255
mismatched DNA binding	TIGRFAM	molecular function	1.9E-101
mismatch repair complex	PANTHER	cellular component	1.5E-255

Gene Card

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