Gene Card
Best human hits
LIN28A; LIN28B; YBX2
Species
Unique Gene ID
Moocci.g00003337
Gene Model ID
Moocci.CG.ELv1_2.S173722.g03337
Location
S173722:34427..39879
Transcript Models and Sequences
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
8 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Znf_CCHC | Pfam | Zinc finger, CCHC-type |
| Znf_CCHC | SMART | Zinc finger, CCHC-type |
| CSP_DNA-bd | CDD | Cold-shock protein, DNA-binding |
| NA-bd_OB-fold | SUPERFAMILY | Nucleic acid-binding, OB-fold |
| Znf_CCHC | ProSiteProfiles | Zinc finger, CCHC-type |
| CSP_DNA-bd | Pfam | Cold-shock protein, DNA-binding |
| CSD | SMART | Cold shock domain |
| Znf_CCHC_sf | SUPERFAMILY | Zinc finger, CCHC-type superfamily |
| GO Term | Annotation Origin | Type |
|---|
GO (Orthology)
40 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| P-body | Hs | cellular component |
| G-quadruplex RNA binding | Hs | molecular function |
| nucleic acid binding | Hs | molecular function |
| DNA binding | Hs | molecular function |
| RNA binding | Hs | molecular function |
| mRNA binding | Hs | molecular function |
| protein binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| nucleolus | Hs | cellular component |
| cytoplasm | Hs | cellular component |
| endoplasmic reticulum | Hs | cellular component |
| rough endoplasmic reticulum | Hs | cellular component |
| cytosol | Hs | cellular component |
| polysome | Hs | cellular component |
| regulation of transcription, DNA-templated | Hs | biological process |
| germ cell development | Hs | biological process |
| zinc ion binding | Hs | molecular function |
| cytoplasmic stress granule | Hs | cellular component |
| miRNA metabolic process | Hs | biological process |
| miRNA catabolic process | Hs | biological process |
| negative regulation of translation | Hs | biological process |
| stem cell population maintenance | Hs | biological process |
| intracellular ribonucleoprotein complex | Hs | cellular component |
| gene silencing by RNA | Hs | biological process |
| pre-miRNA processing | Hs | biological process |
| RNA 3'-end processing | Hs | biological process |
| translation initiation factor binding | Hs | molecular function |
| positive regulation of TOR signaling | Hs | biological process |
| somatic stem cell population maintenance | Hs | biological process |
| miRNA binding | Hs | molecular function |
| positive regulation of neuron differentiation | Hs | biological process |
| positive regulation of translation | Hs | biological process |
| metal ion binding | Hs | molecular function |
| stem cell differentiation | Hs | biological process |
| positive regulation of protein kinase B signaling | Hs | biological process |
| regulation of gene silencing by miRNA | Hs | biological process |
| cellular response to glucose stimulus | Hs | biological process |
| polysome binding | Hs | molecular function |
| sequence-specific mRNA binding | Hs | molecular function |
| positive regulation of cytoplasmic translation | Hs | biological process |
GO (Blast)
23 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| P-body | Hs | cellular component | 145 | 5.04e-44 |
| fibrillar center | Hs | cellular component | 63.2 | 4.02e-12 |
| G-quadruplex RNA binding | Hs | molecular function | 145 | 5.04e-44 |
| nucleic acid binding | Hs | molecular function | 160 | 1.28e-49 |
| DNA binding | Hs | molecular function | 160 | 1.28e-49 |
| RNA binding | Hs | molecular function | 160 | 1.28e-49 |
| mRNA binding | Hs | molecular function | 145 | 5.04e-44 |
| protein binding | Hs | molecular function | 160 | 1.28e-49 |
| nucleus | Hs | cellular component | 160 | 1.28e-49 |
| nucleolus | Hs | cellular component | 160 | 1.28e-49 |
| cytoplasm | Hs | cellular component | 160 | 1.28e-49 |
| endoplasmic reticulum | Hs | cellular component | 145 | 5.04e-44 |
| rough endoplasmic reticulum | Hs | cellular component | 145 | 5.04e-44 |
| cytosol | Hs | cellular component | 160 | 1.28e-49 |
| polysome | Hs | cellular component | 145 | 5.04e-44 |
| zinc ion binding | Hs | molecular function | 160 | 1.28e-49 |
| cytoplasmic stress granule | Hs | cellular component | 145 | 5.04e-44 |
| intracellular ribonucleoprotein complex | Hs | cellular component | 145 | 5.04e-44 |
| translation initiation factor binding | Hs | molecular function | 145 | 5.04e-44 |
| miRNA binding | Hs | molecular function | 145 | 5.04e-44 |
| metal ion binding | Hs | molecular function | 160 | 1.28e-49 |
| polysome binding | Hs | molecular function | 145 | 5.04e-44 |
| sequence-specific mRNA binding | Hs | molecular function | 145 | 5.04e-44 |
GO (InterProScan)
4 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleic acid binding | SMART | molecular function | 9.8E-15 |
| DNA binding | CDD | molecular function | 1.77515E-23 |
| regulation of transcription, DNA-templated | CDD | biological process | 1.77515E-23 |
| zinc ion binding | SUPERFAMILY | molecular function | 1.15E-10 |
