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GENE CARD

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  1. EST 'AV957335'
  2. EST 'FF700035.1'
  3. EST 'BW032577'
  4. EST 'AHC0AAA21YN15_RM1'

Gene Card

Best human hits

LARP6

Species

M.occidentalis

Unique Gene ID

Moocci.g00003880

Gene Model ID

Moocci.CG.ELv1_2.S191570.g03880

Location

S191570:1060..5117

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S191570.g03880.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
Nucleotide-bd_a/b_plait_sf Gene3D Nucleotide-binding alpha-beta plait domain superfamily
RBD_domain_sf SUPERFAMILY RNA-binding domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleic acid binding Hs molecular function
RNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
polysome Hs cellular component
RNA processing Hs biological process
regulation of translation Hs biological process
myosin binding Hs molecular function
intracellular ribonucleoprotein complex Hs cellular component
RNA stem-loop binding Hs molecular function
positive regulation of translation Hs biological process
mRNA 5'-UTR binding Hs molecular function
sequence-specific mRNA binding Hs molecular function

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleic acid binding Hs molecular function 102 1.53e-23
RNA binding Hs molecular function 102 1.53e-23
protein binding Hs molecular function 102 1.53e-23
nucleus Hs cellular component 102 1.53e-23
cytoplasm Hs cellular component 102 1.53e-23
polysome Hs cellular component 102 1.53e-23
myosin binding Hs molecular function 102 1.53e-23
intracellular ribonucleoprotein complex Hs cellular component 102 1.53e-23
RNA stem-loop binding Hs molecular function 102 1.53e-23
mRNA 5'-UTR binding Hs molecular function 102 1.53e-23
sequence-specific mRNA binding Hs molecular function 102 1.53e-23

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding SUPERFAMILY molecular function 1.32E-5