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GENE CARD

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Gene Card

Best human hits

FAT4; PCDHGB2; PCDHGB5

Species

M.occidentalis

Unique Gene ID

Moocci.g00005698

Gene Model ID

Moocci.CG.ELv1_2.S248730.g05698

Location

S248730:4606..7504

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S248730.g05698.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Cadherin-like SUPERFAMILY Cadherin-like
Cadherin_CS ProSitePatterns Cadherin conserved site
Cadherin SMART Cadherin

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

9 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
calcium ion binding Hs molecular function 60.8 6.54e-10
protein binding Hs molecular function 60.8 9.14e-10
intracellular Hs cellular component 60.8 9.14e-10
plasma membrane Hs cellular component 60.8 6.54e-10
integral component of plasma membrane Hs cellular component 60.8 6.54e-10
membrane Hs cellular component 60.8 6.54e-10
integral component of membrane Hs cellular component 60.8 6.54e-10
apical part of cell Hs cellular component 60.8 9.14e-10
extracellular exosome Hs cellular component 60.8 9.14e-10

GO (InterProScan)

5 results

GO Term Analysis Type e-value
calcium ion binding SUPERFAMILY molecular function 2.43E-11
plasma membrane ProSitePatterns cellular component
cell adhesion ProSitePatterns biological process
homophilic cell adhesion via plasma membrane adhesion molecules SMART biological process 0.034
membrane SUPERFAMILY cellular component 2.43E-11