Aniseed - Gene card

Gene Card

Best human hits

NFYA

Species

M.occidentalis

Unique Gene ID

Moocci.g00005851

Gene Model ID

Moocci.CG.ELv1_2.S252920.g05851

Location

S252920:69731..73475

Transcript Models and Sequences

Moocci.CG.ELv1_2.S252920.g05851.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
CCAAT-binding_factor_CS	ProSitePatterns	CCAAT-binding factor, conserved site
NFYA	PANTHER	Nuclear transcription factor Y subunit A
NFYA	ProSiteProfiles	Nuclear transcription factor Y subunit A
NFYA	SMART	Nuclear transcription factor Y subunit A
NFYA	Pfam	Nuclear transcription factor Y subunit A
NFYA	PRINTS	Nuclear transcription factor Y subunit A

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA polymerase II distal enhancer sequence-specific DNA binding	Hs	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
core promoter sequence-specific DNA binding	Hs	molecular function
DNA binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
transcription from RNA polymerase II promoter	Hs	biological process
CCAAT-binding factor complex	Hs	cellular component
protein-DNA complex	Hs	cellular component
transcription regulatory region DNA binding	Hs	molecular function
positive regulation of transcription, DNA-templated	Hs	biological process
rhythmic process	Hs	biological process
RNA polymerase II transcription factor complex	Hs	cellular component

GO (Blast)

12 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II distal enhancer sequence-specific DNA binding	Hs	molecular function	146	1.05e-40
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	146	1.05e-40
core promoter sequence-specific DNA binding	Hs	molecular function	146	1.05e-40
DNA binding	Hs	molecular function	146	1.05e-40
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	146	1.05e-40
protein binding	Hs	molecular function	146	1.05e-40
nucleus	Hs	cellular component	146	1.05e-40
nucleoplasm	Hs	cellular component	146	1.05e-40
CCAAT-binding factor complex	Hs	cellular component	146	1.05e-40
protein-DNA complex	Hs	cellular component	146	1.05e-40
transcription regulatory region DNA binding	Hs	molecular function	146	1.05e-40
RNA polymerase II transcription factor complex	Hs	cellular component	146	1.05e-40

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
DNA binding	ProSitePatterns	molecular function
transcription factor activity, sequence-specific DNA binding	PANTHER	molecular function	3.7E-56
regulation of transcription, DNA-templated	PANTHER	biological process	3.7E-56
CCAAT-binding factor complex	ProSitePatterns	cellular component