Aniseed - Gene card

Gene Card

Best human hits

PAF1

Species

M.occidentalis

Unique Gene ID

Moocci.g00006608

Gene Model ID

Moocci.CG.ELv1_2.S276053.g06608

Location

S276053:2825..4298

Transcript Models and Sequences

Moocci.CG.ELv1_2.S276053.g06608.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term	Analysis	Definition
RNA_pol_II-assoc_Paf1	PANTHER	RNA polymerase II associated factor Paf1
RNA_pol_II-assoc_Paf1	Pfam	RNA polymerase II associated factor Paf1

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

30 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
RNA polymerase II core binding	Hs	molecular function
chromatin binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytoplasm	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
transcription from RNA polymerase II promoter	Hs	biological process
transcription elongation from RNA polymerase II promoter	Hs	biological process
mRNA polyadenylation	Hs	biological process
histone monoubiquitination	Hs	biological process
membrane	Hs	cellular component
Wnt signaling pathway	Hs	biological process
protein ubiquitination	Hs	biological process
histone modification	Hs	biological process
nucleosome positioning	Hs	biological process
Cdc73/Paf1 complex	Hs	cellular component
stem cell population maintenance	Hs	biological process
cell junction	Hs	cellular component
positive regulation of histone methylation	Hs	biological process
positive regulation of mRNA 3'-end processing	Hs	biological process
positive regulation of transcription elongation from RNA polymerase II promoter	Hs	biological process
histone H2B ubiquitination	Hs	biological process
protein localization to nucleus	Hs	biological process
negative regulation of myeloid cell differentiation	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
cellular response to lipopolysaccharide	Hs	biological process
positive regulation of cell cycle G1/S phase transition	Hs	biological process

GO (Blast)

9 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II core binding	Hs	molecular function	510	3.03e-178
chromatin binding	Hs	molecular function	510	3.03e-178
protein binding	Hs	molecular function	510	3.03e-178
nucleus	Hs	cellular component	510	3.03e-178
nucleoplasm	Hs	cellular component	510	3.03e-178
cytoplasm	Hs	cellular component	510	3.03e-178
membrane	Hs	cellular component	510	3.03e-178
Cdc73/Paf1 complex	Hs	cellular component	510	3.03e-178
cell junction	Hs	cellular component	510	3.03e-178

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
transcription elongation from RNA polymerase II promoter	PANTHER	biological process	3.9E-145
histone modification	PANTHER	biological process	3.9E-145
Cdc73/Paf1 complex	PANTHER	cellular component	3.9E-145