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GENE CARD

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Gene Card

Best human hits

CLPB; NFKB1; TOR3A

Species

M.occidentalis

Unique Gene ID

Moocci.g00009720

Gene Model ID

Moocci.CG.ELv1_2.S356428.g09720

Location

S356428:18375..23214

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

14 results

IPR Term Analysis Definition
Sedlin PANTHER Trafficking protein particle complex subunit 2
Sedlin Pfam Trafficking protein particle complex subunit 2
Longin-like_dom_sf SUPERFAMILY Longin-like domain superfamily
AAA+_ATPase SMART AAA+ ATPase domain
Ankyrin_rpt ProSiteProfiles Ankyrin repeat
Ankyrin_rpt SMART Ankyrin repeat
Ankyrin_rpt-contain_dom ProSiteProfiles Ankyrin repeat-containing domain
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
Ankyrin_rpt Pfam Ankyrin repeat
Ankyrin_rpt-contain_dom CDD Ankyrin repeat-containing domain
ATPase_AAA_core Pfam ATPase, AAA-type, core
ClpA/B PRINTS ClpA/B family
Clp_ATPase_C Pfam Clp ATPase, C-terminal
Ankyrin_rpt-contain_sf SUPERFAMILY Ankyrin repeat-containing domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

7 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleotide binding Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
mitochondrion Hs cellular component
hydrolase activity Hs molecular function
ATPase activity Hs molecular function
cellular response to heat Hs biological process

GO (Blast)

33 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 544 0.0
transcription regulatory region sequence-specific DNA binding Hs molecular function 50.8 1.73e-06
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 50.8 1.73e-06
RNA polymerase II distal enhancer sequence-specific DNA binding Hs molecular function 50.8 1.73e-06
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 50.8 1.73e-06
transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding Hs molecular function 50.8 1.73e-06
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 50.8 1.73e-06
DNA binding Hs molecular function 50.8 1.73e-06
chromatin binding Hs molecular function 50.8 1.73e-06
transcription factor activity, sequence-specific DNA binding Hs molecular function 50.8 1.73e-06
protein binding Hs molecular function 544 0.0
ATP binding Hs molecular function 544 0.0
extracellular region Hs cellular component 50.8 1.73e-06
nucleus Hs cellular component 50.8 1.73e-06
nucleoplasm Hs cellular component 50.8 1.73e-06
cytoplasm Hs cellular component 50.8 1.73e-06
mitochondrion Hs cellular component 544 0.0
endoplasmic reticulum Hs cellular component 50.4 1.84e-06
endoplasmic reticulum lumen Hs cellular component 50.4 1.84e-06
cytosol Hs cellular component 50.8 1.73e-06
transcription factor binding Hs molecular function 50.8 1.73e-06
hydrolase activity Hs molecular function 544 0.0
ATPase activity Hs molecular function 544 0.0
I-kappaB/NF-kappaB complex Hs cellular component 50.8 1.73e-06
secretory granule lumen Hs cellular component 50.8 1.73e-06
specific granule lumen Hs cellular component 50.8 1.73e-06
identical protein binding Hs molecular function 50.8 1.73e-06
protein homodimerization activity Hs molecular function 50.8 1.73e-06
actinin binding Hs molecular function 50.8 1.73e-06
sequence-specific DNA binding Hs molecular function 50.8 1.73e-06
transcription regulatory region DNA binding Hs molecular function 50.8 1.73e-06
protein heterodimerization activity Hs molecular function 50.8 1.73e-06
extracellular exosome Hs cellular component 50.4 1.84e-06

GO (InterProScan)

4 results

GO Term Analysis Type e-value
protein binding SMART molecular function 9.9E-4
ATP binding Pfam molecular function 1.5E-42
intracellular PANTHER cellular component 3.1E-49
ER to Golgi vesicle-mediated transport PANTHER biological process 3.1E-49