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GENE CARD

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Gene Card

Best human hits

KATNB1; TAF5; TAF5L

Species

M.occidentalis

Unique Gene ID

Moocci.g00012504

Gene Model ID

Moocci.CG.ELv1_2.S415308.g12504

Location

S415308:100738..106817

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S415308.g12504.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
WD40_repeat_CS ProSitePatterns WD40 repeat, conserved site
WD40_repeat ProSiteProfiles WD40 repeat
WD40/YVTN_repeat-like_dom_sf Gene3D WD40/YVTN repeat-like-containing domain superfamily
WD40_repeat SMART WD40 repeat
G-protein_beta_WD-40_rep PRINTS G-protein beta WD-40 repeat
WD40_repeat Pfam WD40 repeat
WD40_repeat_dom_sf SUPERFAMILY WD40-repeat-containing domain superfamily
WD40_repeat_dom ProSiteProfiles WD40-repeat-containing domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
transcription factor activity, sequence-specific DNA binding Hs molecular function
transcription coactivator activity Hs molecular function
histone acetyltransferase activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
transcription from RNA polymerase II promoter Hs biological process
nuclear speck Hs cellular component
STAGA complex Hs cellular component
transcription factor TFTC complex Hs cellular component
cytoplasmic ribonucleoprotein granule Hs cellular component
histone H3 acetylation Hs biological process

GO (Blast)

36 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nuclear chromatin Hs cellular component 149 1.43e-41
spindle pole Hs cellular component 97.1 2.07e-23
transcription factor activity, sequence-specific DNA binding Hs molecular function 192 2.86e-58
transcription coactivator activity Hs molecular function 192 2.86e-58
histone acetyltransferase activity Hs molecular function 192 2.86e-58
protein binding Hs molecular function 192 2.86e-58
nucleus Hs cellular component 192 2.86e-58
nucleoplasm Hs cellular component 149 1.43e-41
transcription factor TFIID complex Hs cellular component 149 1.43e-41
cytoplasm Hs cellular component 97.1 2.07e-23
centrosome Hs cellular component 97.1 2.07e-23
microtubule organizing center Hs cellular component 97.1 2.07e-23
spindle Hs cellular component 97.1 2.07e-23
cytosol Hs cellular component 97.1 2.07e-23
cytoskeleton Hs cellular component 97.1 2.07e-23
microtubule Hs cellular component 97.1 2.07e-23
plasma membrane Hs cellular component 97.1 2.07e-23
microtubule binding Hs molecular function 97.1 2.07e-23
katanin complex Hs cellular component 97.1 2.07e-23
microtubule-severing ATPase activity Hs molecular function 97.1 2.07e-23
actin cytoskeleton Hs cellular component 149 1.43e-41
microtubule cytoskeleton Hs cellular component 97.1 2.07e-23
membrane Hs cellular component 97.1 2.07e-23
nuclear speck Hs cellular component 192 2.86e-58
axon Hs cellular component 97.1 2.07e-23
growth cone Hs cellular component 97.1 2.07e-23
midbody Hs cellular component 97.1 2.07e-23
STAGA complex Hs cellular component 192 2.86e-58
transcription factor TFTC complex Hs cellular component 192 2.86e-58
cytoplasmic ribonucleoprotein granule Hs cellular component 192 2.86e-58
identical protein binding Hs molecular function 149 1.43e-41
neuronal cell body Hs cellular component 97.1 2.07e-23
transcription regulatory region DNA binding Hs molecular function 149 1.43e-41
protein heterodimerization activity Hs molecular function 97.1 2.07e-23
protein dimerization activity Hs molecular function 149 1.43e-41
dynein complex binding Hs molecular function 97.1 2.07e-23

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding SUPERFAMILY molecular function 1.94E-46