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GENE CARD

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  1. Gene 'Moocci.CG.ELv1_2.S50...' > 

Gene Card

Best human hits

DDX39B

Species

M.occidentalis

Unique Gene ID

Moocci.g00013535

Gene Model ID

Moocci.CG.ELv1_2.S434474.g13535

Location

S434474:8277..10692

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S434474.g13535.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
DEAD/DEAH_box_helicase_dom Pfam DEAD/DEAH box helicase domain
Helicase_C CDD Helicase, C-terminal
Helicase_ATP-bd SMART Helicase superfamily 1/2, ATP-binding domain
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
Helicase_ATP-bd ProSiteProfiles Helicase superfamily 1/2, ATP-binding domain
Helicase_C Pfam Helicase, C-terminal
Helicase_C ProSiteProfiles Helicase, C-terminal
Helicase_C SMART Helicase, C-terminal

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

41 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
nucleotide binding Hs molecular function
spliceosomal complex assembly Hs biological process
transcription export complex Hs cellular component
mRNA splicing, via spliceosome Hs biological process
liver development Hs biological process
nucleic acid binding Hs molecular function
RNA binding Hs molecular function
ATP-dependent RNA helicase activity Hs molecular function
helicase activity Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
spliceosomal complex Hs cellular component
U4 snRNP Hs cellular component
U6 snRNP Hs cellular component
nucleolus Hs cellular component
cytoplasm Hs cellular component
termination of RNA polymerase II transcription Hs biological process
mRNA processing Hs biological process
RNA export from nucleus Hs biological process
mRNA export from nucleus Hs biological process
RNA-dependent ATPase activity Hs molecular function
RNA splicing Hs biological process
RNA secondary structure unwinding Hs biological process
nuclear matrix Hs cellular component
nuclear speck Hs cellular component
hydrolase activity Hs molecular function
ATPase activity Hs molecular function
U6 snRNA binding Hs molecular function
U4 snRNA binding Hs molecular function
mRNA 3'-end processing Hs biological process
positive regulation of DNA-templated transcription, elongation Hs biological process
identical protein binding Hs molecular function
ATP-dependent protein binding Hs molecular function
positive regulation of translation Hs biological process
mRNA transport Hs biological process
negative regulation of DNA damage checkpoint Hs biological process
cellular response to DNA damage stimulus Hs biological process
regulation of gene expression Hs biological process
membrane Hs cellular component

GO (Blast)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 608 0.0
transcription export complex Hs cellular component 608 0.0
nucleic acid binding Hs molecular function 608 0.0
RNA binding Hs molecular function 608 0.0
ATP-dependent RNA helicase activity Hs molecular function 608 0.0
helicase activity Hs molecular function 608 0.0
protein binding Hs molecular function 608 0.0
ATP binding Hs molecular function 608 0.0
nucleus Hs cellular component 608 0.0
nucleoplasm Hs cellular component 608 0.0
spliceosomal complex Hs cellular component 608 0.0
U4 snRNP Hs cellular component 608 0.0
U6 snRNP Hs cellular component 608 0.0
nucleolus Hs cellular component 608 0.0
cytoplasm Hs cellular component 608 0.0
RNA-dependent ATPase activity Hs molecular function 608 0.0
nuclear matrix Hs cellular component 608 0.0
nuclear speck Hs cellular component 608 0.0
hydrolase activity Hs molecular function 608 0.0
ATPase activity Hs molecular function 608 0.0
U6 snRNA binding Hs molecular function 608 0.0
U4 snRNA binding Hs molecular function 608 0.0
identical protein binding Hs molecular function 608 0.0
ATP-dependent protein binding Hs molecular function 608 0.0

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nucleic acid binding Pfam molecular function 3.6E-30
ATP binding Pfam molecular function 3.6E-30

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