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GENE CARD

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Gene Card

Best human hits

FBN1; FBN3; HMCN1

Species

M.occidentalis

Unique Gene ID

Moocci.g00013757

Gene Model ID

Moocci.CG.ELv1_2.S438880.g13757

Location

S438880:7666..16461

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S438880.g13757.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

15 results

IPR Term Analysis Definition
EGF-like_dom ProSiteProfiles EGF-like domain
TSP1_rpt ProSiteProfiles Thrombospondin type-1 (TSP1) repeat
Growth_fac_rcpt_cys_sf SUPERFAMILY Growth factor receptor cysteine-rich domain superfamily
TSP1_rpt Pfam Thrombospondin type-1 (TSP1) repeat
EGF-like_CS ProSitePatterns EGF-like, conserved site
EGF-type_Asp/Asn_hydroxyl_site ProSitePatterns EGF-type aspartate/asparagine hydroxylation site
EGF-like_dom Pfam EGF-like domain
TSP1_rpt_sf SUPERFAMILY Thrombospondin type-1 (TSP1) repeat superfamily
EGF_Ca-bd_CS ProSitePatterns EGF-like calcium-binding, conserved site
TSP1_rpt SMART Thrombospondin type-1 (TSP1) repeat
TSP1_rpt_sf Gene3D Thrombospondin type-1 (TSP1) repeat superfamily
EGF-like_Ca-bd_dom Pfam EGF-like calcium-binding domain
EGF-like_dom SMART EGF-like domain
EGF-like_Ca-bd_dom SMART EGF-like calcium-binding domain
EGF_dom Pfam EGF domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
microfibril Hs cellular component 209 8.87e-55
integrin binding Hs molecular function 209 8.87e-55
hormone activity Hs molecular function 209 8.87e-55
extracellular matrix structural constituent Hs molecular function 209 8.87e-55
calcium ion binding Hs molecular function 228 5.67e-61
protein binding Hs molecular function 209 8.87e-55
extracellular region Hs cellular component 228 5.67e-61
proteinaceous extracellular matrix Hs cellular component 228 5.67e-61
basement membrane Hs cellular component 228 5.67e-61
extracellular space Hs cellular component 209 8.87e-55
cytoplasm Hs cellular component 228 5.67e-61
endoplasmic reticulum lumen Hs cellular component 209 8.87e-55
cell cortex Hs cellular component 228 5.67e-61
heparin binding Hs molecular function 209 8.87e-55
extracellular matrix constituent conferring elasticity Hs molecular function 209 8.87e-55
cell junction Hs cellular component 228 5.67e-61
extracellular matrix Hs cellular component 228 5.67e-61
cleavage furrow Hs cellular component 228 5.67e-61
identical protein binding Hs molecular function 209 8.87e-55
macromolecular complex binding Hs molecular function 209 8.87e-55
extracellular exosome Hs cellular component 228 5.67e-61

GO (InterProScan)

1 result

GO Term Analysis Type e-value
calcium ion binding Pfam molecular function 4.2E-11