Aniseed - Gene card

Gene Card

Best human hits

DR1; NFYB; POLE3

Species

M.occidentalis

Unique Gene ID

Moocci.g00014417

Gene Model ID

Moocci.CG.ELv1_2.S449471.g14417

Location

S449471:22404..27227

Transcript Models and Sequences

Moocci.CG.ELv1_2.S449471.g14417.01.t
Moocci.CG.ELv1_2.S449471.g14417.02.t
Moocci.CG.ELv1_2.S449471.g14417.03.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
Histone-fold	Gene3D	Histone-fold
Histone-fold	SUPERFAMILY	Histone-fold
CBFA_NFYB_domain	Pfam	Transcription factor CBF/NF-Y/archaeal histone domain
Transcrpt_fac_NFYB/HAP3_CS	ProSitePatterns	Transcription factor, NFYB/HAP3, conserved site

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA polymerase II distal enhancer sequence-specific DNA binding	Hs	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
DNA binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
CCAAT-binding factor complex	Hs	cellular component
protein-DNA complex	Hs	cellular component
sequence-specific DNA binding	Hs	molecular function
transcription regulatory region DNA binding	Hs	molecular function
positive regulation of transcription, DNA-templated	Hs	biological process
protein heterodimerization activity	Hs	molecular function
repressing transcription factor binding	Hs	molecular function
RNA polymerase II transcription factor complex	Hs	cellular component

GO (Blast)

22 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II distal enhancer sequence-specific DNA binding	Hs	molecular function	167	9.59e-51
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	167	9.59e-51
DNA binding	Hs	molecular function	167	9.59e-51
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	167	9.59e-51
transcription corepressor activity	Hs	molecular function	50.4	1.78e-07
DNA-directed DNA polymerase activity	Hs	molecular function	54.7	3.04e-09
protein binding	Hs	molecular function	167	9.59e-51
nucleus	Hs	cellular component	167	9.59e-51
nucleoplasm	Hs	cellular component	167	9.59e-51
Ada2/Gcn5/Ada3 transcription activator complex	Hs	cellular component	54.7	3.04e-09
transcription factor binding	Hs	molecular function	50.4	1.78e-07
epsilon DNA polymerase complex	Hs	cellular component	54.7	3.04e-09
CCAAT-binding factor complex	Hs	cellular component	167	9.59e-51
transferase activity	Hs	molecular function	54.7	3.04e-09
nucleotidyltransferase activity	Hs	molecular function	54.7	3.04e-09
TBP-class protein binding	Hs	molecular function	50.4	1.78e-07
protein-DNA complex	Hs	cellular component	167	9.59e-51
sequence-specific DNA binding	Hs	molecular function	167	9.59e-51
transcription regulatory region DNA binding	Hs	molecular function	167	9.59e-51
protein heterodimerization activity	Hs	molecular function	167	9.59e-51
repressing transcription factor binding	Hs	molecular function	167	9.59e-51
RNA polymerase II transcription factor complex	Hs	cellular component	167	9.59e-51

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
nucleus	ProSitePatterns	cellular component
regulation of transcription, DNA-templated	ProSitePatterns	biological process
sequence-specific DNA binding	ProSitePatterns	molecular function
protein heterodimerization activity	Gene3D	molecular function	5.6E-29