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GENE CARD

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Gene Card

Best human hits

AP3B2; COPB1

Species

M.occidentalis

Unique Gene ID

Moocci.g00015046

Gene Model ID

Moocci.CG.ELv1_2.S457942.g15046

Location

S457942:150..4456

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S457942.g15046.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
COPB1_appendage_platform_dom Pfam Coatomer beta subunit, appendage platform domain
COPB1 PANTHER Coatomer beta subunit (COPB1)
ARM-like Gene3D Armadillo-like helical
Clathrin/coatomer_adapt-like_N Pfam Clathrin/coatomer adaptor, adaptin-like, N-terminal
ARM-type_fold SUPERFAMILY Armadillo-type fold
Coatomer_bsu_C Pfam Coatomer beta subunit, C-terminal

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

29 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
Golgi membrane Hs cellular component
structural molecule activity Hs molecular function
binding Hs molecular function
protein binding Hs molecular function
cytoplasm Hs cellular component
endoplasmic reticulum membrane Hs cellular component
endoplasmic reticulum-Golgi intermediate compartment Hs cellular component
Golgi apparatus Hs cellular component
Golgi-associated vesicle Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
intracellular protein transport Hs biological process
ER to Golgi vesicle-mediated transport Hs biological process
retrograde vesicle-mediated transport, Golgi to ER Hs biological process
intra-Golgi vesicle-mediated transport Hs biological process
protein transport Hs biological process
membrane Hs cellular component
viral process Hs biological process
vesicle-mediated transport Hs biological process
membrane coat Hs cellular component
COPI vesicle coat Hs cellular component
transport vesicle Hs cellular component
COPI-coated vesicle Hs cellular component
COPI-coated vesicle membrane Hs cellular component
secretory granule membrane Hs cellular component
cytoplasmic vesicle Hs cellular component
intracellular membrane-bounded organelle Hs cellular component
tertiary granule membrane Hs cellular component
ficolin-1-rich granule membrane Hs cellular component

GO (Blast)

26 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 954 0.0
structural molecule activity Hs molecular function 954 0.0
transporter activity Hs molecular function 43.1 6.61e-04
binding Hs molecular function 954 0.0
protein binding Hs molecular function 954 0.0
cytoplasm Hs cellular component 954 0.0
endoplasmic reticulum membrane Hs cellular component 954 0.0
endoplasmic reticulum-Golgi intermediate compartment Hs cellular component 954 0.0
Golgi apparatus Hs cellular component 954 0.0
Golgi-associated vesicle Hs cellular component 954 0.0
cytosol Hs cellular component 954 0.0
plasma membrane Hs cellular component 954 0.0
membrane Hs cellular component 954 0.0
membrane coat Hs cellular component 954 0.0
AP-3 adaptor complex Hs cellular component 43.1 6.61e-04
COPI vesicle coat Hs cellular component 954 0.0
transport vesicle Hs cellular component 954 0.0
COPI-coated vesicle Hs cellular component 954 0.0
COPI-coated vesicle membrane Hs cellular component 954 0.0
clathrin-coated vesicle membrane Hs cellular component 43.1 6.61e-04
secretory granule membrane Hs cellular component 954 0.0
cytoplasmic vesicle Hs cellular component 954 0.0
intracellular membrane-bounded organelle Hs cellular component 954 0.0
tertiary granule membrane Hs cellular component 954 0.0
ficolin-1-rich granule membrane Hs cellular component 954 0.0
axon cytoplasm Hs cellular component 43.1 6.61e-04

GO (InterProScan)

7 results

GO Term Analysis Type e-value
structural molecule activity Pfam molecular function 2.6E-59
binding SUPERFAMILY molecular function 3.17E-26
cytoplasm PANTHER cellular component 3.0E-265
intracellular protein transport PANTHER biological process 3.0E-265
vesicle-mediated transport Pfam biological process 2.6E-59
membrane coat Pfam cellular component 2.7E-37
COPI vesicle coat Pfam cellular component 2.6E-59